Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g02779 ATGGAAAACCCTACTCCTTATGAAGCTAAGAATGGTGACTTTTGCAAAGGTGCAAAGCTAAGGCGGATGAAACGAGTTATAATCTTGATAAAAACAATTGAGATTCTGAAGGCTAAGATAGCCCTTATTCGATTGAAATATGAAGTCAATAGAAAGAAACTTCAATTGTTGGAGATTGAGAACCAAATGCTGAAATCAGCTGTGCTTGAAGCGGAACAACTTTTGAAACTTAAACAAGCCCAAAAGCAAAGGTTGATTGAACTACAGCGCATTAATTGGGTCTCTGAACCTTCCGATGGGCAAATCCAGAAGGAGTGGTTGATGGCGCCGAAGAAGCAGCTTGAGGGGATTATGTGGAAGAAGCTTTCTGCAGCAACAGATCAGTTGTTAGCGGTCACTAGTGGTACTGATGTTAGATCAGGGAATATGATTTTTGTGCCTATTTTGGATGATGGAATTTTCCAATTTGATTGTTCTGAAAATGTTAGAGATGCAGCATATCCCAGCATTTCTTTTGTGAATAACAGGGATAGAGAGATGCCCATCACTACTCACAAGGTTCCTTCATATACCCCTACTTTTGAGTGCCTTCTAAGGCAGCAAGTTGTCACACTTCAGCTGCCTTTAGGTTCCTCCCTCTATGGAACTGGAGAAGTTAGTGGACAACTCGAGAGGACGGCCGTTCTTCCAAATGGCGAGGCACTAGGATTTCTTGTTGACACTACAAGGCGCTGTGAGATTGATCTGAGGAAAGAATCAACAATACGGTTCGTTGCTCTAGACCTGTTTGATCTTTTTCCTCAAAAGGATTCCTTGCATGAAAAGTATTGGTATGTGCAGAAGCTATTTGATGAAATGTTAGAGTTGGCTGCACATAAGGTGTTTGATGAAATGGCTGTTAGAGATGTTGTGTCTGTGGTCAAGTATTCTCTCCTGGGCTCTATCATTTCGAACCTTCCTTTAATTCTACTCCTATTGAGTGCTGATGATAACGGTGAAGGTGGGACATTTGCTCTCTTTTCACTTCCCTGTAGGCATGCCAAGTTTAATTTACTCCCCAATCAACAAGCACCTAATGAGGAGTTGTCGTCCTACAAATATGGTCCCTCATCACAGATTGCAGCCTCATCTCCACTGAAAAGGTTTTTGGAGAAACATAAAAGGTTAAGAACAACCCTGCTTGTTGTGGTACTGTTTGGTGCTTGCATGGTCATAGGTGATGAAGTTGCATTTATGTTTGCGCCAATTATAATCATATGGCTTGTATCCATTTTTTCTGTTGGGCTCTATAACAAGATATATTGGAATCCAAAAATAGTCTGGGCTATCTCCCCACACTATATCATCAAGTTCTTTATCAAGACTAGCAAAGAAGATTCCAGTGTAGAAGATAGAAATGACAAAAATGAAAATTTATCTTATCACCAAAACTGA 1434 0.4052 MENPTPYEAKNGDFCKGAKLRRMKRVIILIKTIEILKAKIALIRLKYEVNRKKLQLLEIENQMLKSAVLEAEQLLKLKQAQKQRLIELQRINWVSEPSDGQIQKEWLMAPKKQLEGIMWKKLSAATDQLLAVTSGTDVRSGNMIFVPILDDGIFQFDCSENVRDAAYPSISFVNNRDREMPITTHKVPSYTPTFECLLRQQVVTLQLPLGSSLYGTGEVSGQLERTAVLPNGEALGFLVDTTRRCEIDLRKESTIRFVALDLFDLFPQKDSLHEKYWYVQKLFDEMLELAAHKVFDEMAVRDVVSVVKYSLLGSIISNLPLILLLLSADDNGEGGTFALFSLPCRHAKFNLLPNQQAPNEELSSYKYGPSSQIAASSPLKRFLEKHKRLRTTLLVVVLFGACMVIGDEVAFMFAPIIIIWLVSIFSVGLYNKIYWNPKIVWAISPHYIIKFFIKTSKEDSSVEDRNDKNENLSYHQN. 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g02779 477 Coils Coil 54 91 - -
Seca5g02779 477 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 298 409 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca5g02779 477 Pfam K+ potassium transporter 408 457 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g02779 Seca-Chr5 80662377 80669023 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g02779 292 459 Inorganic Solute Cotransporters AT3G02050 50.463 9.35e-54 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g02779 K03549 - gmx:100776888 209.149