Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g02757 ATGATCAAAAGTGGACAATTATCTGAGCCATATAAGGGAATTAGTGATTGTTTTGCTCGAATCATGCAGGATGAGGGTGTAATTTCTCTCTGGAGAGGCAATACTGCTAATGTTTTTAGATATTTCTCTGGAATTAGGATGGGAACCCCTGCTCTTACTTCTAGAGGATTTGTTGTGGAGGATTTTATCAAGGTAGCAGAGTTCTTTGGTGCATCAGTAAATTTGGCTGTGAAGATTAAGACAGAGAGCAAAGGAACAAGGCATTGTTGGAGCGTCAGTAAATTTGATGCATCAGTAAATTTGCATTTCATTGTTGGAGCTGTTGGAGATACTCTTGGTAATTTTGTGTGTTCCATGTGA 360 0.3889 MIKSGQLSEPYKGISDCFARIMQDEGVISLWRGNTANVFRYFSGIRMGTPALTSRGFVVEDFIKVAEFFGASVNLAVKIKTESKGTRHCWSVSKFDASVNLHFIVGAVGDTLGNFVCSM. 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g02757 119 SUPERFAMILY Mitochondrial carrier 8 43 IPR023395 -
Seca5g02757 119 Gene3D Aspartate Aminotransferase, domain 1 34 103 IPR015422 GO:0003824
Seca5g02757 119 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1 66 IPR018108 -
Seca5g02757 119 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 1 50 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Seca5g02757 119 Pfam Mitochondrial carrier protein 8 46 IPR018108 -
Seca5g02757 119 SUPERFAMILY PLP-dependent transferases 41 94 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g02757 Seca-Chr5 79989847 79990206 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g02757 1 64 Antiporters AT4G28390 60.938 7.66e-20 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g02757 K05863 - pvy:116113292 81.2629