Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g02753 ATGCAAGGCTTCGCAAAGAGAGCTATTGATGGAGATGCCCTGCCACCAGAAGAGCAGGAACAAGGGCCCAAGAGACCCAAAGTGGTTAAACCCTTTGGTCATAGTGATTCACCATTTCAACCTTGGCAACCCTCCTGGATGAAGGACCTTGGTATTGCACAAGAAAGCAGTAGTGCAGGCAAGCCATGTCTTCACCTTGGCATTTCCAATAGCCTTGTTGAACAAGATGAGAATAAGATGATTATAGAAAACTCAACTCCTGAATCTGATCATACTGATAAGGGCCCCATCAATGGTGGTGGTGCAACTTCAGGTGTTGATGATGATGGCAAAGCTGCACAAACTGATAAAGACCAAACAGACCTACTTGCACCCGGCTCGGGCTGCAACACTCAACCAGAAATGGATCCTAAGACACTCGAAAGAATCATAGCAAACCGAGCTTCAGCACAAAGATCCAGGATGAGGAAAATTGAATATGTGGCAGGCTTGGAAGAGAAAGCAAAAACTTACCAGAATAAGATAAATCACCTTCATCCACAAATTGCAGCCTGCAAACATCGCCAGCGATTATTACAGATTGAGCAGCATAAACTGAAACTACAAATGGCTATTTATGAAAAAGAAAGAATATTTCAAGAAGTGGAGATTGAAAAGAACAAACAGGACATAAAAAGGCTAAACGAGCTCCACAAGCAACTTGAAACTCAAGCAAGGGAAAAGATGTTGAATAGGAGTGCACATCCAATGCTGAATAGGAGTACTGCTGTGCAACTTATGTCCAATCCCAACATGAATCCTTTTGGCTTTGGACCGCGATTTTTCTTAAACTCATATCAAGTTCAAAATGGAGCAAGAACATCAAGAATGCAAACTGGTATAAGCCAAGGGCTTCAAAATGGAGTGGGAACATCAAGAATGCAAACTGGTATAAGCCAAGGGCCACAAAATCAGAGCCACATGTGGACATATTTATGGAATAATGGACAGAGGTCAACTCCTGATTTGAACTAA 1014 0.4241 MQGFAKRAIDGDALPPEEQEQGPKRPKVVKPFGHSDSPFQPWQPSWMKDLGIAQESSSAGKPCLHLGISNSLVEQDENKMIIENSTPESDHTDKGPINGGGATSGVDDDGKAAQTDKDQTDLLAPGSGCNTQPEMDPKTLERIIANRASAQRSRMRKIEYVAGLEEKAKTYQNKINHLHPQIAACKHRQRLLQIEQHKLKLQMAIYEKERIFQEVEIEKNKQDIKRLNELHKQLETQAREKMLNRSAHPMLNRSTAVQLMSNPNMNPFGFGPRFFLNSYQVQNGARTSRMQTGISQGLQNGVGTSRMQTGISQGPQNQSHMWTYLWNNGQRSTPDLN. 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g02753 337 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 142 156 IPR004827 GO:0003700|GO:0006355
Seca5g02753 337 MobiDBLite consensus disorder prediction 11 31 - -
Seca5g02753 337 MobiDBLite consensus disorder prediction 84 113 - -
Seca5g02753 337 MobiDBLite consensus disorder prediction 118 137 - -
Seca5g02753 337 Coils Coil 217 244 - -
Seca5g02753 337 PANTHER BASIC LEUCINE ZIPPER 34 76 255 - -
Seca5g02753 337 Pfam Basic region leucine zipper 136 185 IPR004827 GO:0003700|GO:0006355
Seca5g02753 337 CDD bZIP_plant_RF2 142 190 IPR044759 GO:0003700|GO:0006355
Seca5g02753 337 Gene3D - 138 204 - -
Seca5g02753 337 MobiDBLite consensus disorder prediction 1 45 - -
Seca5g02753 337 SMART brlzneu 134 205 IPR004827 GO:0003700|GO:0006355
Seca5g02753 337 SUPERFAMILY Leucine zipper domain 138 187 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g02753 Seca-Chr5 79760715 79763842 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g02753 49 214 bZIP Transcription Factor Family AT3G58120 28.415 1.85e-15 73.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca5g02753 bZIP_2 9.4e-07 CL0018