Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g02744 ATGGGGCGGTGGGCGGTGGCCGAAAATGGTGATCAACATACAACAGCTGATGTGGGTTATACATCTTTTTTCAAGATCTGCATGCATCTCGTTAATTCCCTCTCAGGAATTGGTATTGTATCCATGCCTTACACATTGGCATTTGGGGGATGGTTAAGCTTATTGATGCTATTTGTGATCGCCATTGCTTGCTGTTACACTGGCATTTTGATCAAAAGATGCATGGATATGGATCCTGATATCAGGACCTTTCCTGACTTAGGTCAATGTGCATTTGGAGACAAGGGGAGGGTCATGGTATCAATCATTATGAATGTTGAGCTTTACCTTGCTGTCACAGGTTTTCTGATTTTAGAAGGAGACAATATAAACAAATTAGTACCAAACATGCATTTTCACCTTGCAGGGTTAAACATTAGTGGTAACACAATTTTTACCATAGTTGCTGCCCTTGTTATTTTGCCTACTGTTTTGTTGGAGGACCTGAGCCTGCTATCTTATGTCTCTGCTAGTGGGGTTTTAGCTTCTTCCATTTTCATCCTCTCTTTATTCTGGAATGCCACCATTGATGGAACAGGATTTCATGGAAAGGGAACACTTCTCAGATGGAGTGGAATGCCTACTTCTATCAGTCTATATGCCTTTTGTTATGGTTCTCATCCGATCCTTCCCACCCTCTACCATTCCATGAGAAACAAAAGCCAGTTCTCCAGTGTCCTGTTTGTATGCTTTTTAGTGTGCACTCTTGGTTATGCAGTAGCAGCTGTTTTGGGCTACTTAATGTTTGGAGAAGAGGTTAATTTGCAGGTGACTTTGAACCTCCAAACAAGCAGGTGGAGTTCACGAGTGGCAATATACACTACCTTGATCAACCCCATAACCAAATATGCATTGACACTTACTCCAGTCTTAAATGCCATAAAAAGTAATGTTCCATGCCGTTACAACAAAAGGCTCACACATATACTTGTCAGTACCTCCTCACTAATCAGTTCTCTTATTGTTGCTGTGGCTATTCCCTTATTTGGATACCTTATGTCACTTGTTGGAGCATTATTAAGCATCTCGGCTTTAATTTTAGTGCCATCAGTGTGCTACTTGAAGATTTCGGGAACTTACAAGAGATTTGGGTTTGAAATGATCATCAATTATTCAATAATAGTAATGGGGGTTATTGTTGCTATTTTAGGTACTTATAGGTCTCTTAAAGATATCATTCAGAATTTATAA 1230 0.4 MGRWAVAENGDQHTTADVGYTSFFKICMHLVNSLSGIGIVSMPYTLAFGGWLSLLMLFVIAIACCYTGILIKRCMDMDPDIRTFPDLGQCAFGDKGRVMVSIIMNVELYLAVTGFLILEGDNINKLVPNMHFHLAGLNISGNTIFTIVAALVILPTVLLEDLSLLSYVSASGVLASSIFILSLFWNATIDGTGFHGKGTLLRWSGMPTSISLYAFCYGSHPILPTLYHSMRNKSQFSSVLFVCFLVCTLGYAVAAVLGYLMFGEEVNLQVTLNLQTSRWSSRVAIYTTLINPITKYALTLTPVLNAIKSNVPCRYNKRLTHILVSTSSLISSLIVAVAIPLFGYLMSLVGALLSISALILVPSVCYLKISGTYKRFGFEMIINYSIIVMGVIVAILGTYRSLKDIIQNL. 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g02744 409 PANTHER OS05G0424000 PROTEIN-RELATED 23 397 - -
Seca5g02744 409 Pfam Transmembrane amino acid transporter protein 21 400 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g02744 Seca-Chr5 79636505 79646204 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g02744 8 406 Amino Acid or Auxin Permease AAAP Family AT3G28960 53.117 5.23e-153 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g02744 K15015 - gmx:100784690 610.912