Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g02743 ATGGCTGGTGATAGATGCTCTTCCATGACTACCGTACCCTTATTGGGTGATGAAGAAGAAGTGAATAATAATGATTCAAGTGAGGGGGAGGTGAACAAAATTGAAGATATACACACTGTGGATGTGGGTAGCACCTCCTTATTCAAGACTGGCTTCCATCTTGTTAATGCTATCTCAGGAGTTGGTATTGTATCAATACCTTATGCATTGGCATCTGGTGGATGGTTAAGCATATTGCTACTATTTGTGATTGCCATTGCTTGTTGTTACACTGGCATATTGGTCAAAAGATGCATGGATATAGACCCTATTATCAAGACTTTTCCTGACATAGGTCACCGTGCATTTGGAGACAAAGGGAGACTAATGGTATCAATCATCATGAATTGTGAGCTATACCTTGCTGTAACAGGCTTTCTGATTTTACAAGGGGACAATCTAAACAAATTAGCACCAAACATGCAACTTGACATTGCAGGATTAACAATTGGTGATACAACAAGTTTTACCATAATTGCTGCCCTTGTTATTTTGCCTACTGTTTTGTTAGAGGACCTGGGCCTGCTATCTTATATTTCTGCTAGTGGGGCTTTAGCTTCTTCCATCTTCATCCTCTCTTTATTCTGGAATGGCACCATTGATGGAACAGGATTTCATGGAAAGGGAACACTTGTTAGATGGAGTGGAATACCTTCTGCTGTCAGTTTATATGCCTTCTGCTATAGTGCTCATCCTGTCCTTCCTACCCTCTACAATTCAATGAGGAACAAAAGTCATTTCTCCAGGGTTCTGTTTGTATGCTTTTCAGGATGCACCCTTGGTTATGCAATTGCAGCTATTTTGGGTTACTTGATGTTTGGTGAAGAGGTTGAATCACAGGTGACTTTGAATCTCCAAACAGGCAAGTTGAGTTCACGCATGGCAATATACACAACCTTGGTCAATCCCATAACCAAATACGCATTGATGCTTACTCCAGTCATAAATGCTGTAAAAAATAAGGTTTCATGGCATTACAACAGAAGGGTCACACATATTCTTGTTAGTACCTCTTTGTTAATCAGTTCTCTTATTGTTGCTGTGACCATTCCCTTATTTGGATACCTCATGTCACTTGTTGGAGCATTACTAAGTGTCACGGCTTCAATTTTAGTCCCATCAGTGTGCTACTTGAAGATTTCAGGAGCTTACAAGAGATTTGGGTCTGATATGATTATCAATTATTCAATAATAGTAATGGGAGTTACTATTGCTATTGTAGGTACTTATAGATCTCTTATAGATATAATTCAGAATTTATGA 1302 0.3909 MAGDRCSSMTTVPLLGDEEEVNNNDSSEGEVNKIEDIHTVDVGSTSLFKTGFHLVNAISGVGIVSIPYALASGGWLSILLLFVIAIACCYTGILVKRCMDIDPIIKTFPDIGHRAFGDKGRLMVSIIMNCELYLAVTGFLILQGDNLNKLAPNMQLDIAGLTIGDTTSFTIIAALVILPTVLLEDLGLLSYISASGALASSIFILSLFWNGTIDGTGFHGKGTLVRWSGIPSAVSLYAFCYSAHPVLPTLYNSMRNKSHFSRVLFVCFSGCTLGYAIAAILGYLMFGEEVESQVTLNLQTGKLSSRMAIYTTLVNPITKYALMLTPVINAVKNKVSWHYNRRVTHILVSTSLLISSLIVAVTIPLFGYLMSLVGALLSVTASILVPSVCYLKISGAYKRFGSDMIINYSIIVMGVTIAIVGTYRSLIDIIQNL. 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g02743 433 PANTHER AMINO ACID TRANSPORTER 39 423 - -
Seca5g02743 433 Pfam Transmembrane amino acid transporter protein 44 425 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g02743 Seca-Chr5 79624763 79632047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g02743 35 430 Amino Acid or Auxin Permease AAAP Family AT3G28960 53.149 7.51e-152 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g02743 K15015 - gmx:100784690 671.003