Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g02737 ATGGGGAATATTGAATTCAAGACATTAACATTGAATGATCTTATGTCTTTTCACTTTTCGAACCTGGAAGTGGCATTTATCTTTTATCGTTGGTTTGCAAGATTCAAAGGTTTTGCAGCTCGGAAGGACCGGACAGTGAAAAACAAGCAGAAGGAAGTGATACAACAAACATTTGTTTGTTATAGGGAAGGTGGAAAGACACGAAATCATAGTGTTCTGAAACGGCCTCCACGCAAGAGTATACAGTGTTGA 252 0.3889 MGNIEFKTLTLNDLMSFHFSNLEVAFIFYRWFARFKGFAARKDRTVKNKQKEVIQQTFVCYREGGKTRNHSVLKRPPRKSIQC. 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g02737 83 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 18 79 - -
Seca5g02737 83 Pfam FAR1 DNA-binding domain 28 78 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g02737 Seca-Chr5 79587103 79587354 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca5g02737 FAR1 3.6e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g02737 - K17604 tpra:123915148 95.5153