Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca5g02674 | ATGGTCTTTCAGAGAATAATGCCTTTGTTTCTATGTCTACTTGTTATTCTGATATCTCAAGCCACTGCCACTGTCAAGCCAGAATACAACTACACACACTGCTTCCAATATGGAGATTATCCCCCTGATAGCACCTATCAGACCAACCTCAAAGCCCTTCTTTCAAGACTAACTTCCAACACACAAATTGACTATGGCTTCTACAATTCATCCTATGGTGACTCCAACAATGAAGTCTACGTAACTGGGCTTTGCAGGGGAGATGTTACTTCACATACATGCCAAAGTTGCCTCAACGATTTAAGTTCCCTTCTCCTGAATCAATGTCCAAAAGAGATGGAGGCAGTGGGACTATATGATAAATGCATATTACACTATTCATATCGCGCAATATATGGTTACGATTCATATGAATATGCATTCCTGGTCTACTATGTGGCGAGTGACACTAATGTCACAAATTGGGATCAATACAATTCTGTGCTAATGAATTTGTTGTCAAGACTAAAAAAAGCTGCAATAAGTGATTCTCATCCCAATCGTAAGTTTGCTGTAGGAAAAGCTACAGGTACAAATTCTCAAACTATATATGGAGTTGTTCAGTGCTCACCTGATTTGACAGTGGCAGAATGCAATGACTGTTTGGATGGTGCTGTCTCAGAAATTGCAAATTATTGTTATAACAAGTCAGCTGGTGCAATTATTAAACTTAGTTGTAACTTAAGATATCAGAATTCCAGCTTCTATGAGCCTACGACTGATGAATTGACACTACCATTACAATTGTCACCGCAACCATCTCCTCCTGCACCATCCAATACTGCAAACTCCTCACACACTACTCATCACGGAAACAAGAAATCACAAGCTATCATAGCCGAAGTTGTGGCTACTGTTGCCTGTGTTGGGTTGCTGATCTTTATTTGCATCTACTTAATAGTGAGGAAGGCAACAAAACATATTGAGAGTAAGTCCAGATGTGAAGTGAAAATTGTCAATGAAAATATAGGAGAGTCATTACAATTTGACTTTGACACCATCAGAATTGCTACAAACGACTTCTCTGATGCAAATAAGCTTGGACAAGGTGGATTTGGTCCTGTTTACAAGGGCATTCTCTTTGATAAACAAGAAATTGCAGTCAAAAGGTTATCTGATAATTCTGGACAAGGAGATATTGAATTCAAGAATGAAGTGCTGTTGATGGCCAGACTCAAACACCAAAATTTAGTCAGGCTCCTTGGTTTCTGTTATGAAAGAGAAGAACGGTTACTTGTCTATGAGTTTCTTCCCAATAGAAGCCTTGACTACTTCTTATTTGATTCAATTAAGCGCAGAGAGTTGGATTGGAAAATGCGCTACAAAATAATTGAAGGCATTGCAAGGGGCCTTCTTTACCTTCATGAGGATTCTCAACTTAGGATTATTCATCGTGATCTTAAAGCAAGTAACATTCTTTTAGATGCAGAGATGAACCCTAAGATATCAGATTTCGGTTTGGCAAAGCTGTTTGTTGTGGATCAAACTCATGCTGTTGCAAGTAAAATTGCAGGAACCCTTGGATATATGGCACCTGAGTATGCAAGGCATGGAAAATTCTCAGCCAAGTCAGATGTCTTTAGTTTTGGTGTTATAATACTAGAGATTGTAAGTGGCCAAAAGAATGGTCGATTTCATAATGGAGAGAATGTGGAGCATCTATTAAGCTTTGCTTGGAACAATTGGAGGAAGGGTACAATTTCTAATATCATAGATCCCACCTTAAATGATGATGCTTTAAGAGATGAAATAACAAGATGCAGTCATATTGGGTTACTTTGTGTTCAAGAAAGGGTTGCTGACAGACCAACTTTGGCTTCAGTTATGCTTATGCTTGATAGCCACTCTTTCTCTCTCCCAGTTCCCTTGCAACCTGCCTTTTATATGAAAGCTAGATGCTTGCCAAACTTCCATTTTTCAGAGTGCAGTTCTGTGCCATCAGGATCAAATGAACTCAAAGGTAACTCTGTTGAAGTGTCCATAAATGAGGCCTCAATTAGTAGTATGTGTCCTCGTTAG | 2058 | 0.3902 | MVFQRIMPLFLCLLVILISQATATVKPEYNYTHCFQYGDYPPDSTYQTNLKALLSRLTSNTQIDYGFYNSSYGDSNNEVYVTGLCRGDVTSHTCQSCLNDLSSLLLNQCPKEMEAVGLYDKCILHYSYRAIYGYDSYEYAFLVYYVASDTNVTNWDQYNSVLMNLLSRLKKAAISDSHPNRKFAVGKATGTNSQTIYGVVQCSPDLTVAECNDCLDGAVSEIANYCYNKSAGAIIKLSCNLRYQNSSFYEPTTDELTLPLQLSPQPSPPAPSNTANSSHTTHHGNKKSQAIIAEVVATVACVGLLIFICIYLIVRKATKHIESKSRCEVKIVNENIGESLQFDFDTIRIATNDFSDANKLGQGGFGPVYKGILFDKQEIAVKRLSDNSGQGDIEFKNEVLLMARLKHQNLVRLLGFCYEREERLLVYEFLPNRSLDYFLFDSIKRRELDWKMRYKIIEGIARGLLYLHEDSQLRIIHRDLKASNILLDAEMNPKISDFGLAKLFVVDQTHAVASKIAGTLGYMAPEYARHGKFSAKSDVFSFGVIILEIVSGQKNGRFHNGENVEHLLSFAWNNWRKGTISNIIDPTLNDDALRDEITRCSHIGLLCVQERVADRPTLASVMLMLDSHSFSLPVPLQPAFYMKARCLPNFHFSECSSVPSGSNELKGNSVEVSINEASISSMCPR. | 686 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca5g02674 | 685 | FunFam | Cysteine-rich receptor-like protein kinase 10 | 315 | 429 | - | - | |
Seca5g02674 | 685 | Gene3D | Transferase(Phosphotransferase) domain 1 | 430 | 631 | - | - | |
Seca5g02674 | 685 | SUPERFAMILY | Protein kinase-like (PK-like) | 337 | 645 | IPR011009 | - | |
Seca5g02674 | 685 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 475 | 487 | IPR008271 | GO:0004672|GO:0006468 | |
Seca5g02674 | 685 | CDD | STKc_IRAK | 360 | 626 | - | - | |
Seca5g02674 | 685 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 38 | 677 | - | - | |
Seca5g02674 | 685 | MobiDBLite | consensus disorder prediction | 259 | 283 | - | - | |
Seca5g02674 | 685 | Gene3D | Phosphorylase Kinase; domain 1 | 313 | 429 | - | - | |
Seca5g02674 | 685 | Gene3D | - | 28 | 130 | IPR038408 | - | |
Seca5g02674 | 685 | Gene3D | - | 139 | 248 | IPR038408 | - | |
Seca5g02674 | 685 | ProSiteProfiles | Protein kinase domain profile. | 354 | 631 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca5g02674 | 685 | FunFam | Cysteine-rich receptor-like protein kinase 28 | 430 | 633 | - | - | |
Seca5g02674 | 685 | Pfam | Protein tyrosine and serine/threonine kinase | 358 | 621 | IPR001245 | GO:0004672|GO:0006468 | |
Seca5g02674 | 685 | FunFam | Cysteine-rich receptor-like protein kinase 10 | 142 | 248 | - | - | |
Seca5g02674 | 685 | SMART | serkin_6 | 354 | 631 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca5g02674 | 685 | Pfam | Salt stress response/antifungal | 38 | 127 | IPR002902 | - | |
Seca5g02674 | 685 | Pfam | Salt stress response/antifungal | 150 | 245 | IPR002902 | - | |
Seca5g02674 | 685 | ProSiteProfiles | Gnk2-homologous domain profile. | 28 | 131 | IPR002902 | - | |
Seca5g02674 | 685 | FunFam | Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 | 27 | 131 | - | - | |
Seca5g02674 | 685 | ProSiteProfiles | Gnk2-homologous domain profile. | 140 | 248 | IPR002902 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca5g02674 | Seca-Chr5 | 75048430 | 75051980 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca5g02674 | 5 | 685 | Receptor kinase-like Gene Family | AT4G21410 | 46.132 | 0.0 | 565 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Seca5g02674 | PK_Tyr_Ser-Thr | 6.1e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca5g02674 | - | - | gmx:100790058 | 868.996 |