Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g02653 ATGAAGTTAGAAGTGGCGATAACCTCCAAAGAAATCATCAAACCATCTTCTCCAACCCCTAACCATCTTCGCCACTACCAACTCTCCTTTCTTGACCAAGTCGCTCCCATTGTTTATAACCCTTTGGTTCTATTTTACTCTTCCGACGGTACCACTGACCAATTCAACACAACCACCATATCCAACCAGCTAAAGAAATCTCTATCACATGTCTTAACCCATTTCTACCCACTTGCGGGAAGAATTAATAATACCAAGAGTTTCATAGACTGCAATGATGAGGGCATCTCTTACTTAGAAGCAAAAGTGAAGTCCAAACTTATGGACATTATTCATAAGCCAGCCCCAAGAGAACTCAACCATTTGCTTCCATTTCAACTAGATGATATCACTGACGTCCCATTTGGTGTTCAACTTAACGTCTTTGATTGTGGTGGTATTGCAATTGGTGCATGCCTTTCTCACCAAATTGCAGACGGTTTATCATTTTTCACTTTCCTCAATAATTGGGCAGCTATTGCTAGTGAACAAGCTGTGTTGCCAAAACCACAATTTGTTTCAGCTAAGCACTTCCCACCCAAAAATGTATCTGTGTTATATCCTCAAGGTGACATCACGAAGCAGAACATAATATGCAAGATGTTTGTGTTTAATGCTTCCGTTATTGAAAATCTCAGGGCGAGATATGCTGACACCCCAGACTTCAAAAACGAGAAGTTCCCCACACGTGTGGAGGCTTTATCTGCTTTCATTTGGAGTCGTTATGTGGCTGTTACTAGAGACGAATATTCTTGTCCACAGAGAAGATATGTTGTGGTTCATGCAGTGAACCTGCGTCCAAAGATGGAACCTTCACTGCCTCCAGATTCATTTGGTAACTACTTCCGATTCATTATGACAATTCCAACGTTGAACGCTGGAGAGGAGTGTTATGGGCTGGCAAAGCAGATAAGGAATGAGATAAAGAAGATCGACAAGGAGTATGTGAGAAAACTCCCAGAGGGGAATGAACATTTGGATTTCCTTAAGGATAATTGGGATAGAGTGCTTGTGAAGGAGGAGTTAGTTTCGTTTAGTTTCACTAGTTGGTGTAGGTTTCCTGTGTATGATGCTGATTTTGGTTGGGGAAAACCAATATGGGTAGGTACTCCTGCTTTTAATTTAAGAAATTTGGTTGTGTTTGTTGATTCCAAGTTCGGTGGTGGCATAGAGGCGTATGTTAGCTTGAAGGTGGAAGACATGGCAAAGTTTGAAGCAGATGAGGAGTTTCTTGCATGTGTGGATAAAGAACGGACTTATTGA 1302 0.414 MKLEVAITSKEIIKPSSPTPNHLRHYQLSFLDQVAPIVYNPLVLFYSSDGTTDQFNTTTISNQLKKSLSHVLTHFYPLAGRINNTKSFIDCNDEGISYLEAKVKSKLMDIIHKPAPRELNHLLPFQLDDITDVPFGVQLNVFDCGGIAIGACLSHQIADGLSFFTFLNNWAAIASEQAVLPKPQFVSAKHFPPKNVSVLYPQGDITKQNIICKMFVFNASVIENLRARYADTPDFKNEKFPTRVEALSAFIWSRYVAVTRDEYSCPQRRYVVVHAVNLRPKMEPSLPPDSFGNYFRFIMTIPTLNAGEECYGLAKQIRNEIKKIDKEYVRKLPEGNEHLDFLKDNWDRVLVKEELVSFSFTSWCRFPVYDADFGWGKPIWVGTPAFNLRNLVVFVDSKFGGGIEAYVSLKVEDMAKFEADEEFLACVDKERTY. 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g02653 433 Pfam Transferase family 4 423 - -
Seca5g02653 433 Gene3D - 1 198 IPR023213 -
Seca5g02653 433 PANTHER F21J9.9 7 426 - -
Seca5g02653 433 Gene3D - 207 427 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g02653 Seca-Chr5 73318246 73319547 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g02653 3 418 Monolignol Biosynthesis Gene Families AT5G48930 26.339 1.90e-37 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g02653 K13065 - gmx:102670206 625.55