Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g02652 ATGAAGTTAGAAGTGGGGGTAATCTCCAAAGAAATCATCAAACCCTCTTCTCCAACCCCTTTGGATTTTGGTCATTACCAACTTTCCTTTCTCGACCAAGTCGCTCCCATGGTGTATAACCCTTTGGTTCTCTTTTACTCTTCCGATGGTACCACTCAATTCAACACAACCACCATATCAAAACAGCTCAAGAAATCTCTCTCAGATATCTTAACCCATTTCTACCCGCTTGCGGGAAGAATGAATAATAGCAAGAGTTTCATAAACTGCAACGATGAGGGCATCCCTTACTTAGAAGCAAGAGTGAAGTCCAAACTTGTGGACATTATTCATAAGCCAGTCCCAGGAGAACTCAACCATTTGCTTCCATTCCAACTAGATGACATCACCGACATCACATTTGGTGTTCAACTTAACGTCTTTGATTGCGGTGGTATTGCAATTGGCGCATGCCTTTCACACCAAATTGCAGACGGTTTATCATTCTTCACTTTCCTTAATAATTGGGCAGCAATGTCTAGTGGACAAGTTGTGTTACCAAAACCACAATTTGTTTCAGCTAAACTCTTCCCACCTAAAAATGTTTCGGGGTTTGATCCTCGAAGTGGCATCACGAAGGATAACATAATATGCAAGATGTTTGTGTTTGATGCTTCCGTTATTGAAAATTTAAGAGCAAGATATGCAAATACCGCAGGCTTTGAAAATGAGAAGCAACCTACGCGAGTGGAGGCTTTATCTTCTTTCATTTGGAGTCGTTATGTGGCTGTTACTAGAAACGAATGTGGTCCACAGAGAAGATATGTTGTGGTTCATGCAGTGAACCTGCGTCCAAAGATGGAACCTTCACTGCCTCCAGATTCATTTGGAAACTACTTCCGATTCATTATGACTATTCCAATGTTGAACACTGGAGAGGAGTGTTATGGTCTAGCGAAGCAGGTGAGGGAACAGATAAAGAAGATTGACCAGGATTATGTGAGAAAACTTGGAGAGGGGAATGAGCATTTGGATTTCCTTAAGGATAGTACGTATAGAGTGCTTGTGAAGGAGGAGTTAGTTTCGTTTAATTTTACTAGTTTGTGTAGGTTTCCTTTGTATGACGCGGATTTTGGTTGGGGAAAACCAACGTGGGTTGGTTCACCTGCTTTAACTTTTAAAAATCTGGTTGTGTTTGTTGATACCAAGATTGGTGGTGGCGTAGAGGCGTATGTTAGCTTGAAGGTAGAAGACATGGCAAAGTTCGAAGCAGATGAGGAGTTGCTTGCCTGTGTGAACAAAGAAAGGATTTGTTGA 1296 0.4159 MKLEVGVISKEIIKPSSPTPLDFGHYQLSFLDQVAPMVYNPLVLFYSSDGTTQFNTTTISKQLKKSLSDILTHFYPLAGRMNNSKSFINCNDEGIPYLEARVKSKLVDIIHKPVPGELNHLLPFQLDDITDITFGVQLNVFDCGGIAIGACLSHQIADGLSFFTFLNNWAAMSSGQVVLPKPQFVSAKLFPPKNVSGFDPRSGITKDNIICKMFVFDASVIENLRARYANTAGFENEKQPTRVEALSSFIWSRYVAVTRNECGPQRRYVVVHAVNLRPKMEPSLPPDSFGNYFRFIMTIPMLNTGEECYGLAKQVREQIKKIDQDYVRKLGEGNEHLDFLKDSTYRVLVKEELVSFNFTSLCRFPLYDADFGWGKPTWVGSPALTFKNLVVFVDTKIGGGVEAYVSLKVEDMAKFEADEELLACVNKERIC. 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g02652 431 Gene3D - 1 197 IPR023213 -
Seca5g02652 431 PANTHER F21J9.9 7 424 - -
Seca5g02652 431 Gene3D - 206 425 IPR023213 -
Seca5g02652 431 Pfam Transferase family 4 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g02652 Seca-Chr5 73217468 73218763 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g02652 3 416 Monolignol Biosynthesis Gene Families AT5G48930 25.446 1.11e-34 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g02652 K13065 - gmx:102670206 683.715