Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g02649 ATGCTCGGTGATATCTCTAACACTCAACCTTATTCACTCACTGACTCGATTCAGAATTTGAGATCCGAAATTGAAGAGAAAGAGAGAGAAACGACGTTGTTAGCTTCAAATCCCACTGATGACCGTTCTCTCGTTTCTCCGCTGCCACAAGCTCTCCTCGAGAGGCTCAAGAAATATGGTCAAGAAGAAGTGATTGTCCTCTGGCAGGAGCTCTCCCCTGAGGAACGGGACCTTTTCGTCAAGAAAATCAAGAGTTTAGATCTTTCGAGAATTGATCGGATTATTCGGTGTTTCCTTCGATCTCGTCCAGCATCAAAATTGTTTGGGGATGAGGAAGTCCAGCTCTGGAAGCCATTCAGAGATAAACTGGAAACAATCATGGTAATGCTTGATAAACGTTACATTGATGATTCTAATTTTACTTGGTTTAGGGATACACATAAGGTGTTTGATAATTTGTCTGAGAGGCTAACTGTGAACATGGATGTACTCCAAATGTGGGTTATGATCTCTAATTTCAAGTTAGCGTACAATCTTCTTCGTCGCCCTGATGGAACTTTCAACAGTGACTTAGCAGAGCTCCTTGATCGGAATGTTTCTGCAAATACTAACCCTGTGGATGGAGTGTTCTCTTTTGATGTTATTGTGGACAGGGAAACGAATCTACTTACTCGAATCTACCGGCCTGCTGAGGGAGAAGATAGTCGTGTGAATATTGTTGACCTTGAGAATCCTGTGACCTCTGAGGTTCTTCCTGTCATCATTTTCTTTCATGGTGGAAGCTTTGCACACTCTTCAGCTAACAGTGCTATATATGACACCCCGCTTGATGAGAAGCGTCTAGATGGGAGATACTTTGTGAGAGTTCAAGATCGAGACTGTCACCAGGTTCTTCAGAACCATCAAGCTGGACAGAATACACCTTTATCCCCTATACACAAGGTGATATCATTTCACCGCTCGACAAACATGTCGCAGCCTCGCAGGTGA 990 0.4343 MLGDISNTQPYSLTDSIQNLRSEIEEKERETTLLASNPTDDRSLVSPLPQALLERLKKYGQEEVIVLWQELSPEERDLFVKKIKSLDLSRIDRIIRCFLRSRPASKLFGDEEVQLWKPFRDKLETIMVMLDKRYIDDSNFTWFRDTHKVFDNLSERLTVNMDVLQMWVMISNFKLAYNLLRRPDGTFNSDLAELLDRNVSANTNPVDGVFSFDVIVDRETNLLTRIYRPAEGEDSRVNIVDLENPVTSEVLPVIIFFHGGSFAHSSANSAIYDTPLDEKRLDGRYFVRVQDRDCHQVLQNHQAGQNTPLSPIHKVISFHRSTNMSQPRR. 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g02649 329 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 254 270 IPR002168 GO:0016787
Seca5g02649 329 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 41 129 IPR029044 -
Seca5g02649 329 Gene3D alpha/beta hydrolase 147 284 IPR029058 -
Seca5g02649 329 Coils Coil 17 37 - -
Seca5g02649 329 SUPERFAMILY alpha/beta-Hydrolases 198 273 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g02649 Seca-Chr5 73131360 73132428 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g02649 164 274 Carbohydrate Esterase AT3G05120 69.643 9.62e-50 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g02649 K14493 - gmx:100775474 194.512