Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g02637 ATGAAGGGCTTTGTGCTTTCAAGTCCAAGACGTGATTTTCACATGGACAAGAACTCAAAAGTTGAATTTGCTCACCAACGAACACTTATATCATATGAGCTATACGAGTCAATTAAATCTAGTTGTAATGGTGATTATATCAATCGCGATCCTAACAACACAAATTGTACGTCAGATTATGAAGCCTTCTTTGAGGATGACGACTATGCGGTTGGTGAATTATGGGCAAATGATCCACATGTTCGAAAGGCTCTACACGTTAGGGAGGTACAATACAATCTACATGGCCTTTACTTGGGCACCGACTTACCTCTTCAAGCGCGGACGCGAGCAAGCAGATGGTGGTCGGTGGGAGCGGCTAATTGCAGGCGACCTGGTGCGGCGAATGGGCGCAGCGAACTGCAGACTGCACAGCAAACGATCGGTGAACTGGAGCGGCGATGGGAGCGAACTGGCGCGGCGATCGGCGTGGAAGGGAGAGCGGAGGCCGGAGAGGAACAGTCAATTAAATCTAGTTGTAATGGTGATTATATCAATCGCGATCCTAACAACACAAATTGTACGTCAGATTATGAAGCCTTCTTTGAGTTAGTTCGTTATATAAATGAATTTCAAATTATGGAACCAAGTTGTATGCGTGGATCTTACGAGAATGAAAGAGTTCTTTCTGAAGGGTTCAAAGGTATCCGCAACAGAAGATTTTGGTGTCGGGATGACGACTATGCGATTGGTGAATTATGGGCAAATGATCCACATGTTCGAAAGGCTCTACACATTAGGGAGGGAACCAAAGGGCACTTCCAAAGATGCAATTGTAGTATGGCATATACAAAGAACGTTCATAGTGTTGTTGAATATCTTCGAAATCTCACCCACACAAATCTTCAATCTCTAATTTACTGTGGTGATCTAGACATGTCGATACCGTATCTTAGTTCACTTTCTATTGTCAAGTCAATGAATTTGAATTTGGATAAGACTTGGCATCCATGGTTCGTTGATGGTGAAGTGGCAGGATTAGTTTAA 1026 0.4347 MKGFVLSSPRRDFHMDKNSKVEFAHQRTLISYELYESIKSSCNGDYINRDPNNTNCTSDYEAFFEDDDYAVGELWANDPHVRKALHVREVQYNLHGLYLGTDLPLQARTRASRWWSVGAANCRRPGAANGRSELQTAQQTIGELERRWERTGAAIGVEGRAEAGEEQSIKSSCNGDYINRDPNNTNCTSDYEAFFELVRYINEFQIMEPSCMRGSYENERVLSEGFKGIRNRRFWCRDDDYAIGELWANDPHVRKALHIREGTKGHFQRCNCSMAYTKNVHSVVEYLRNLTHTNLQSLIYCGDLDMSIPYLSSLSIVKSMNLNLDKTWHPWFVDGEVAGLV. 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g02637 341 Gene3D alpha/beta hydrolase 1 98 IPR029058 -
Seca5g02637 341 SUPERFAMILY alpha/beta-Hydrolases 166 341 IPR029058 -
Seca5g02637 341 Coils Coil 127 147 - -
Seca5g02637 341 Pfam Serine carboxypeptidase 164 340 IPR001563 GO:0004185|GO:0006508
Seca5g02637 341 Gene3D alpha/beta hydrolase 150 341 IPR029058 -
Seca5g02637 341 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 166 335 IPR001563 GO:0004185|GO:0006508
Seca5g02637 341 SUPERFAMILY alpha/beta-Hydrolases 1 101 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g02637 Seca-Chr5 72967049 72971583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g02637 242 339 Calmodulin-binding Proteins AT2G22960 37.755 2.56e-20 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g02637 K16296 - gmx:100791997 274.248