Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g02611 CTGAATGAAACGTCGTCGTCTGGTTCCTCCTTTGGCACCAGCATAAGCACTACTGATGCCTCTGCCTCTAGTTATGGTTCCTCTGTGTGCTTGGAGCTCTGGCACACGTGTGCGGGTCCAATGATTTCTTTTCCGAAGAAAGGAAGCGTGGTTGTGTACTTCCCTCAGGGACACTTGGAGCATCTTCAGGATTTTCCGCTCTTTTTCTGTGATAACATTCCATCCCATGTGTTATGTCGTGTTGTTGATGTCAAGTTTCATGTGAATATTCCTCTGCTGCTGCTCCCTTCTTTTCATGGTACAAATATAATGTTGTCTCAAGTGCAGCAGAAGTTCCGGGAAGGGGAAGTTTATGTTGATGGTGAAGAGGAGGACACTGAAGTTGTGATGAAGTCAACAACACCCCACATGTTTTGCAAGACTCACTGCTTCTGA 435 0.4621 LNETSSSGSSFGTSISTTDASASSYGSSVCLELWHTCAGPMISFPKKGSVVVYFPQGHLEHLQDFPLFFCDNIPSHVLCRVVDVKFHVNIPLLLLPSFHGTNIMLSQVQQKFREGEVYVDGEEEDTEVVMKSTTPHMFCKTHCF. 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g02611 144 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 28 141 IPR044835 GO:0003677|GO:0006355|GO:0009725
Seca5g02611 144 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g02611 Seca-Chr5 72067620 72068740 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g02611 26 141 B3 DNA Binding Superfamily AT5G60450 38.346 3.35e-19 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g02611 K14486 - gmx:100808119 154.451