Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca5g02513 | ATGGGTCTCTCAAATTTCCCGTGTTCAGCTGAAGGGGTGCTACCTGTGCTTGTGATGAACACAGTCCTTTCAGTGGCTCTGTTGAAGAACATGTTTAGATCCATGCTCCAAGTAATTGGTGGCTCTTATTATTCTCCTTCTTCTCCTTCAGATGAGTCCCACATCGATGAGATTGAGAGTTGTTCAAGGGAAAGGAGGGTGTCAATTAGCCAGTACAAGTCATTGTGCCACAGCATAGGAAGAAGAACGGTTATGGTGGAGTGCTGCGTGTGTCTGTGTGGTTTTGAAGCGAATCAAGAGGTGAGCGAGTTGCCTTGTAAGCATTTCTTCCATAGAGGATGCTTAGACAAATGGTTTGATAACAAACATACCACTTGCCCTCTGTGTCGTTCCAAGGACTAG | 402 | 0.4552 | MGLSNFPCSAEGVLPVLVMNTVLSVALLKNMFRSMLQVIGGSYYSPSSPSDESHIDEIESCSRERRVSISQYKSLCHSIGRRTVMVECCVCLCGFEANQEVSELPCKHFFHRGCLDKWFDNKHTTCPLCRSKD. | 134 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca5g02513 | 133 | SMART | ringv_2 | 87 | 130 | IPR011016 | GO:0008270 | |
Seca5g02513 | 133 | SUPERFAMILY | RING/U-box | 87 | 131 | - | - | |
Seca5g02513 | 133 | SMART | ring_2 | 88 | 129 | IPR001841 | - | |
Seca5g02513 | 133 | Pfam | Ring finger domain | 87 | 130 | IPR001841 | - | |
Seca5g02513 | 133 | ProSiteProfiles | Zinc finger RING-type profile. | 88 | 130 | IPR001841 | - | |
Seca5g02513 | 133 | PANTHER | - | 1 | 132 | IPR044249 | - | |
Seca5g02513 | 133 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 67 | 133 | IPR013083 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca5g02513 | Seca-Chr5 | 70190845 | 70191246 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca5g02513 | 1 | 131 | C3H Transcription Factor Family | AT2G04240 | 31.373 | 4.87e-22 | 84.0 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca5g02513 | K16285 | - | gmx:100811790 | 196.823 |