Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g02387 ATGGATGAACTCCAGTTGGAACTTCACCATGTTGCAGGTGGACATGGTGAGTATTGCAGTTTCTTGTTCAATTGCAAGATAATTGAAGGTTCATCAATCTATGCAAGTTCCATAGCTAATAGGGTGATTGATGCCATGGACACTCAGTCCGCAGCAACAGTTCCACATACAGTAGCTACTAGATGTGCGGAGGATAGTGTCAAGATCAGGCTCCCAATGTCTCCATCAATCAATACTCTATATGGAACAATAACACATAATAATGATAATAATAGTAGCAGTAAGTTCATGCAGACACCCAGGAGATAA 309 0.4078 MDELQLELHHVAGGHGEYCSFLFNCKIIEGSSIYASSIANRVIDAMDTQSAATVPHTVATRCAEDSVKIRLPMSPSINTLYGTITHNNDNNSSSKFMQTPRR. 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g02387 102 PANTHER TRANSCRIPTION FACTOR BHLH91 1 53 IPR045895 GO:0006355|GO:0048658
Seca5g02387 102 MobiDBLite consensus disorder prediction 82 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g02387 Seca-Chr5 66560871 66561293 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g02387 1 57 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31210 62.069 9.19e-19 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g02387 - - gmx:100782512 98.5969