Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g02369 ATGGCAGTCAAAATTCCTGGAGTTTTAATAGTCTCTGTAAAATCTGCTTGGCTCTGTTTTGCAAATGCATTTCTTGTCAAACAAAGGTATGTGCAATTAATTTGCTTGTTGTACATAGATTCTTGTCTTATGAATATTGACACCGCGGGAATAGCTTCTTTGGTGGAGCTGAATAAGAATCTGACATCACATGGAGTGAGGTTAGCCATCGCTAACCCAAGGTGGCAAGTAATTCACAAGCTAAGATTAGCTAACTTTGTAAGCGAAATTGGAGGAAGGGTTTTCCTGTCTGTGGCAGAAGCTGTAGATGGAATGCTAGGTGCTAAAATGGCTACTGTATAA 342 0.3977 MAVKIPGVLIVSVKSAWLCFANAFLVKQRYVQLICLLYIDSCLMNIDTAGIASLVELNKNLTSHGVRLAIANPRWQVIHKLRLANFVSEIGGRVFLSVAEAVDGMLGAKMATV. 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g02369 113 CDD STAS_SulP_like_sulfate_transporter 2 96 - -
Seca5g02369 113 Pfam STAS domain 3 101 IPR002645 -
Seca5g02369 113 SUPERFAMILY SpoIIaa-like 4 103 IPR036513 -
Seca5g02369 113 ProSiteProfiles STAS domain profile. 46 105 IPR002645 -
Seca5g02369 113 Gene3D STAS domain 1 108 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g02369 Seca-Chr5 65978917 65979858 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g02369 1 110 Inorganic Solute Cotransporters AT5G10180 45.312 7.06e-29 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g02369 K17469 - gmx:100817841 147.517