Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g02368 ATGGATTGTGCACCATTCAAAAATTCCACTGTGGTAATATCATTTTCAAAGATCATTCTCATCTCAATTCGACCTGGCACAGAAACTCTTGGGAAACTTCCTGGAACTGATTTGTTCTGTGATGTCTATCAGTATCCTATGGCGGTTAAGATTCCTGGGGTTATGATAATACGTCTCAAGTCTGCGTTGCTTTGCTTTGCAAATGCCAATTTCGTTAGAGAAAGTATCATCAAATGGGTCACTCAGGAAGAATCACAAGATGACAAGGGAAATTCAAGAAGCACCACTCAACTCGTAATTCTTGACACCTCGAATTTGGTGAACATTGACACATCCGGAATTGCTTCTCTAGAGGAACTGCACAAGAGTTTGTCTTCACATGGGAAACAGTTAGCCATTGTCAACCCTAGGTGGCAAGTGATTCACAAGCTAAAGGTGTCAAACTTTGTCAACAAAATAGGTGGTAGAGTCTTTCTTACTGTTGAAGAAGCTGTTGGCTGCAAGAGTGAGTTCTAA 516 0.4089 MDCAPFKNSTVVISFSKIILISIRPGTETLGKLPGTDLFCDVYQYPMAVKIPGVMIIRLKSALLCFANANFVRESIIKWVTQEESQDDKGNSRSTTQLVILDTSNLVNIDTSGIASLEELHKSLSSHGKQLAIVNPRWQVIHKLKVSNFVNKIGGRVFLTVEEAVGCKSEF. 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g02368 171 PANTHER SULFATE TRANSPORTER 11 166 IPR001902 GO:0016020|GO:0055085
Seca5g02368 171 ProSiteProfiles STAS domain profile. 64 168 IPR002645 -
Seca5g02368 171 Gene3D STAS domain 24 169 IPR036513 -
Seca5g02368 171 FunFam Sulfate transporter 31 24 170 - -
Seca5g02368 171 Pfam STAS domain 45 164 IPR002645 -
Seca5g02368 171 SUPERFAMILY SpoIIaa-like 49 165 IPR036513 -
Seca5g02368 171 CDD STAS_SulP_like_sulfate_transporter 45 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g02368 Seca-Chr5 65930562 65932525 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g02368 11 165 Inorganic Solute Cotransporters AT5G10180 59.615 9.66e-58 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g02368 K17469 - gmx:100781327 291.582