Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g02349 ATGTGGGAACCCACATGGATTGACAAGTATGGCCTTATGTGTTGCAGGCAATGCTTTCGTAGCAATGGCATGGAGATTGGCTTCATTAAGGTCATTATATAA 102 0.4216 MWEPTWIDKYGLMCCRQCFRSNGMEIGFIKVII. 34
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g02349 33 Gene3D 30s Ribosomal Protein S14; Chain N 4 31 IPR043140 -
Seca5g02349 33 PANTHER 40S RIBOSOMAL PROTEIN S29 7 31 IPR039744 GO:0003735|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g02349 Seca-Chr5 65595609 65595710 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g02349 7 30 Cytoplasmic Ribosomal Protein Gene Family AT4G33865 83.333 3.75e-09 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g02349 K02980 - smil:130987758 50.8322