Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g02337 ATGCAGGGATGTGATGCATCTTTGATGCTACAAGGGAATAACACAGAGCAAAGTGATCCAGCAAACAGGTCAGTTGGAGGATTTTCAGTTATAGAATCAGCCAAAAGAGTCCTTGAGATGTTTTGTCCTGGAACAGTTTCTTGTGCTGACATAATTGCTTTGGCAGCTAGAGTCTAG 177 0.4237 MQGCDASLMLQGNNTEQSDPANRSVGGFSVIESAKRVLEMFCPGTVSCADIIALAARV. 59
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g02337 58 Gene3D - 1 58 - -
Seca5g02337 58 SUPERFAMILY Heme-dependent peroxidases 2 58 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca5g02337 58 ProSiteProfiles Plant heme peroxidase family profile. 1 58 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g02337 58 Pfam Peroxidase 2 58 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g02337 58 PRINTS Plant peroxidase signature 45 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g02337 58 PRINTS Plant peroxidase signature 26 39 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g02337 58 PANTHER PEROXIDASE 25-RELATED 2 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g02337 58 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g02337 Seca-Chr5 65212167 65212343 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g02337 1 57 Peroxidase AT2G24800 68.421 1.90e-25 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g02337 K00430 K18328 gmx:102664900 107.071