Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g02313 ATGGCTTCTTACTACATCCTCCTGTTTGTTCTTGTTGCTGCCTCTGCACTTTCTGAAGCTGATGCCAAAAAGAAGTTATCTACAGACTTCTACTCTAGCAGCTGCCCGGAACTGTTGCCTATAGTGAATAAAGGAGTCATAAAAGCCATTAAAAATGAAACTCGCATAGGAGCTTCCTTACTTCGATTGCATTTCCATGATTGCTTTGTAAACGGCTGTGATGCATCAATACTATTGGATGATACAAGCGGTTTCATAGGAGAAAAAACGGCGGCACCTAACAATAATTCAGTTAGAGGATTCAACGTGATCGATGACATTAAAGCCAAGTTGGAGAAAGCATGCCCTGGGGTTGTGTCCTGTGCTGATATTCTTGCTCTGGCTGCTCGAGACTCTGTTGTTTATTTAGGGGGGCCTTCATGGAAAGTAGGCTTGGGAAGAAGGGACTCTACCACAGCTAGCAGAGCTGACGCCAATAATTCCATTCCTGCACCCTTTCTCAATTTAAGTGCTCTCAAAACAAATTTCGCTAACCAGGGGCTCTCGGTGAAGGACTTGGTGGCTCTTTCAGGTACTAGGTACTTACTACATTAG 594 0.4411 MASYYILLFVLVAASALSEADAKKKLSTDFYSSSCPELLPIVNKGVIKAIKNETRIGASLLRLHFHDCFVNGCDASILLDDTSGFIGEKTAAPNNNSVRGFNVIDDIKAKLEKACPGVVSCADILALAARDSVVYLGGPSWKVGLGRRDSTTASRADANNSIPAPFLNLSALKTNFANQGLSVKDLVALSGTRYLLH. 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g02313 197 ProSiteProfiles Plant heme peroxidase family profile. 25 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g02313 197 Pfam Peroxidase 44 193 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g02313 197 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g02313 197 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g02313 197 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g02313 197 PRINTS Haem peroxidase superfamily signature 185 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g02313 197 SUPERFAMILY Heme-dependent peroxidases 26 192 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca5g02313 197 FunFam Peroxidase 29 172 - -
Seca5g02313 197 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Seca5g02313 197 Gene3D - 29 162 - -
Seca5g02313 197 Gene3D Peroxidase, domain 2 163 192 - -
Seca5g02313 197 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g02313 197 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g02313 197 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g02313 197 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g02313 197 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g02313 197 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g02313 197 PANTHER PEROXIDASE 72-RELATED 19 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g02313 Seca-Chr5 64578062 64579857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g02313 23 195 Peroxidase AT5G05340 64.740 6.38e-79 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g02313 K00430 - gmx:100793973 278.87