Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g02299 ATGAGTATGGTTTCTAGAGAGCAAAAGAGAGGAGCACTGCATGAGAAGCTGCAACTTTTGCGTTCTATTACCAACTCTCATGCTGTAAACAAAACATCGATCATAATCGATGCGTCAAAGTATATTGAAGGACTAAAGCAAAAGGTAGAAAGACTAAATCAAGATATAGCCAATGCACAAACTTCAAGCGATGCTACTTTGCCAATGCAGGTTACGGTAGAAGGCGTAGAAAAGGGATTTGTAATAAATGTTTATTCAGAAAGGAGTTGCCCGGGTCTGCTTGTTTCCATATTGGAGTCCTTTGAAGAAATGGGTCTTAATGTGGTGGAAGCTAGGGTTACTTGTACCGACACTTTCCAATTTCAAGCTGTTGGAGGAGAAAGTGAAGAAGAGGGTGAAAGTATTGATGCACAAGCTGTGAAACTGACAATGGGACAAGCAATAAAGAACTGGAGCCAAAGTACCCATCAAAAGTAA 477 0.4046 MSMVSREQKRGALHEKLQLLRSITNSHAVNKTSIIIDASKYIEGLKQKVERLNQDIANAQTSSDATLPMQVTVEGVEKGFVINVYSERSCPGLLVSILESFEEMGLNVVEARVTCTDTFQFQAVGGESEEEGESIDAQAVKLTMGQAIKNWSQSTHQK. 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g02299 158 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 3 153 - -
Seca5g02299 158 Coils Coil 35 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g02299 Seca-Chr5 64445633 64447448 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g02299 13 141 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 27.660 5.33e-09 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g02299 - - gmx:100814138 234.958