Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g02293 ATGTCTCCGACGCCGGGATTCCACGTCCCACTCTTGCCGGAATCCAAAGCATCGGCGCATGAGCCGGCCTCCGTCTCCGGCGCCGTCTTCAACGTCGCCACGAGCATAGTCGGCGCCGGAATCATGTCAATCCCGGCAATCCTGAAGGTTCTCGGCGTGATTCCAGCTTTCGCCATGATTCTGATCGTGGCCGTGCTGGCAGAAGTTTCCGTGGACTTCCTCATGCGGTTCACGCATTCCGGTGAAACGACGACGTATGCTGGAGTCATGAGGGAGGCGTTTGGGCCACCAGGAGCACTAGCGGCTCAAGTTTGCGTCATAATCACCAACCTTGGGGGTTTAATTCTTTACCTAATTATCATCGGGGATGTGCTCTCTGGGAAGCAAAGTGGAGGTGAAGTGCACTTGGGAATTTTGCAACAGTGGTGTGGATTTCACTGGTGGACTTCTCGGGAATTTGCTCTGTTTTTCACTTTGGTCTTTGTTATGCTTCCATTGGTCTTCTACCGTCGTGTAGAGTCCTTGAAGTACAGCTCTGCAATATCAACTCTTCTTGCTGTGGCATTTGTTGCAATATGCTCTGGGTTGGCTATTGTTGCTTTGGTGCAAGGGAAAACACAAACTCCTAGATTGTTTCCTCAGTTTGACTACCAAACCTCATTCTTTGATTTGTTCACTGCAGTTCCTGTTGTTGTCACAGCCTTTACATTTCATTTTAATGTGCATCCGATTGGGTTTGAGCTTGCCAAGCCATCTGATATGACAACAGCTGTTCGATTAGCATTGTTGCTTTGTGCTGTTATTTACTCTACAATAGGTCTATTTGGGTACCTGTTATTTGGGGATTCAACCCAATCAGACATTCTCATCAATTTTGATCAGAATACTGATTCTGCAGTTGCTTCGTTTTTCAATAGTTTAATCCGTGTAAGCTATGCACTCCATATCATGCTGGTATTCCCTCTAGTGAACTTCTCTTTGAGAGCCAACATAGATGAATTACTCTTCTCCAAGAAGCCTCTGCTAGCCACCGACAACAAAAGATTTGTGATCCTTTCCCTGGTGCTGCTAGTCTTTTCCTACCTTGCAGCTATAGCAATCCCAGATATTTGGTACTTCTTTCAATTTCTGGGATCATCATCTGCAGTGTGCCTTGCTTTCATTTTCCCTGGCATTATTGTTTTAAGGGATGCTCCAGGTATATCATCAAGAAGGGAAAAAATTGTAGCATTGATTATGATTATACTAGCTGTAGTTACTAGTGTGATTGCCATTTCCACCAACATATACAATGCTTTAAGTAGCAAATCATAA 1314 0.4513 MSPTPGFHVPLLPESKASAHEPASVSGAVFNVATSIVGAGIMSIPAILKVLGVIPAFAMILIVAVLAEVSVDFLMRFTHSGETTTYAGVMREAFGPPGALAAQVCVIITNLGGLILYLIIIGDVLSGKQSGGEVHLGILQQWCGFHWWTSREFALFFTLVFVMLPLVFYRRVESLKYSSAISTLLAVAFVAICSGLAIVALVQGKTQTPRLFPQFDYQTSFFDLFTAVPVVVTAFTFHFNVHPIGFELAKPSDMTTAVRLALLLCAVIYSTIGLFGYLLFGDSTQSDILINFDQNTDSAVASFFNSLIRVSYALHIMLVFPLVNFSLRANIDELLFSKKPLLATDNKRFVILSLVLLVFSYLAAIAIPDIWYFFQFLGSSSAVCLAFIFPGIIVLRDAPGISSRREKIVALIMIILAVVTSVIAISTNIYNALSSKS. 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g02293 437 PANTHER AMINO ACID TRANSPORTER 14 420 - -
Seca5g02293 437 Pfam Transmembrane amino acid transporter protein 23 424 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g02293 Seca-Chr5 64294961 64297479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g02293 4 431 Amino Acid or Auxin Permease AAAP Family AT3G56200 59.070 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g02293 - - gmx:100813056 701.434