Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g02282 ATGGAATCTGGAAACAAGACATTGTTATGCCAAGATCCTCACGGCCATTATCACAACAGTATCTGGAACTCAGGCAACCCACTCCAATCCCCCTCATCTCTTTTCTTTATGCAGGTGTCTTTGATTACCATAGCCACACAATTCTTTGATTTTTGTCTCAGGCCACTAGGACAATCCTCCCTTGTATCCTATATTCTTGGTGGAGTGCTATTTGGCCCATCAATTCTGGGGCATAATAAGGTGCTGGCACATTCCTTGTTCCCTATGAGAGGTGCTTTGGTGCTTGAGACAATTGCAACATTTTGCCTCATGTTCTTCTACTTCATATGTTGTATGAAGATGGATCCTGCCACAATGCTGAAGACAGAAAAGCAGGCCATAACTATTGGTCTTTCTGTATTCTTATTTACATTGGCAATCCCTACTGGATTGGCCTTTCTGTTGAGGCAATATGTTTCCATGGACAAGAGCCTCTCAGAGGCTCTTCCTTTTATAGCTACCTCACAATCTTTAACTGTGTTTGTTAGCATAGTAGTCCTGCTGACAGAGCTCAAAATCCTTAACACTGACATAGGCCGTCTAGCTATGTCAGCATCAATGTTCGTTGATGTTATAAGCTTTCCTATGACAGTCCTTATGTTTGCTATAGTGCAGACTGTGAATATTGGTGGTAATATTCTGACACTACTATGGATCCTTCTATCCATAGTAGGACTCTTGATTGTTATTATATATGTAATGAGGCCAACAATACTATGGATCGTAGAGCACTCAGAGGGCAAACGTGTTGATGATTTATGCATTTGTTGTATCTTTGTCTTCATTCTCTTCACTGGATTTTTCAGTGAATTTATTGGTCAACATTTTGCTATGGGGCCAATACTTTTAGGCCTGGTTGTTCCAGAAGGGCCACCTATAGGAACAACTTTGCAAACTAAACTGGAGACAATTTGTGAGGCATTTCTGTATCCAATCTACCTTGCTGTTAATGGACTGCAAACTGATATCTTCAAAGTTGACATCCAATCCATGTGGATTGTGGGTCTTGTAATTATAGTTGCTTTCCTGGTAAAGATTGGTGCTGTGATGTTACCAGGATACTATTTCAATGTTCCCATGAAAGACTGTTGTGTGATTGGGCTACTTCTAAATGGAAGAGGCATTGCAGAGATTACCATTTACAATACCCTGAAGGGAAGCAAGCAACTATCTGAACAAGAGTTCACTTTGATGATGGTCTCCATTGTAGTAGTTAATGCTATTATAACACCGCTTATAAAATTCTTACATGATCCTTCAGAACAATATCATACCGGAAGAAGATCTTCAATTCAACATACAAAGAGAGATTCTGAGCTCAGAGTCATGGTCTGTGTTTATGAAAATGAAAACATCCCTACAATCCTCAACATCTTAGAAGCATCCTATGCAAGCAGTGAGAGCACTGTTGCAGTTATAGCACTAGTCCTAGTAGAGCTTCTTGGAAGAGCCAGGCCTATTCTTATTTCTCACCAACCCCAAGATATAGTGAGGTCAAACTCATTCAATTATTCAACACAAATTGACAATGCATTGAGGCAATATGCACAGGTGAATGAAGGGTATGCAACAGTTCAGTCTTTCACTTCAATCTCTGACTTTAACACAATACATGATGATGTTTGCCGAATAGCACTTGACAGAAGAGCCAACATTTTGATCATACCTTTTCACAAAAGATGGGAAATAGATGGTTCTGTGGAGGTAACCAATAGGGGAATCCAAACCATGAACCTTAAAGTCCTTGAAAGAGCACCTTGCTCAGTGGCAATTCTCATTGATAGAGGTGTATTGAGTAGTTCTCCATCACTTTTACTTGCAAGATCAATGTACTATGTTGCTGTATTCTTCATTGGTGGTGCAGATGATGCAGAGGCACTAGCCTATGGTAGTAGAATGGCTAGGCATGAGTGTGTTAGTGTGTCAGTGGTTAGGTTCCTTCTATTTGGAGAAGAAAATTCCAAAGACAGAAAACGTGACAGTGATCTTGTAGATGAATATAGATATTATAATGCTGGAAATCGTAGGTTTGAGATAATGGATGAAGTAGTAAAAGATGGAATAGAGATGTCTTCACGTATCACAAAATTAAGAGATTATTTTGATTTAGTAATGGTGGGGAGGGAACATCCACAGTCTGTTTTGCTTCATGGACATGATCAATGGAGTGAGTGTCCGGAGTTAGGGGTCATTGGAGATATGCTAGCTTCACAGGATCTTGTCACAAAGGCTTCAGTGTTGGTGGTGCAACAACAGAGAATAGGAGGGAGGCTTGTTAAACATACTATGAATCCATTACCAAATCAAAGAGATCAGATGGTGTTGCCAGAGGAGGCAGATATACTCTGCACGCACCCAATGTTTGGACCAGTGAGTGGGAAGGATGGATGGAAAGAGCTTACTTTCATGTATGAGAAAGTTCGAATACGAGATGAACCTACCTGCTCTAAATTTCTCAGAATTTTTGCAACTGAGGGTTGCAAGATGGTAGAAATGTCCTGTGAGGAACATGATAAAGCAGCTGCCAAGAGCCAATTTATAACACACACAATAGGCAGGACATTAGCAGAAATGGATATTAAGTCCACAGCTATTGACACCAAGGGCTTTGAAACACTTGTTCAATTGAAGGAGACCGTGAAGGGATGTAGTTTTGATCTGTATAGTGGATTGTTCGTGCATAACAGATTCGCCAGACAAGAGCTAGAAAACCTTGAGCATGCCTTGTACAAAGTCAAAGAGATGCTGGCTCAAAGGATGCATGAGGAGCAGGGTCCATAA 2820 0.4053 MESGNKTLLCQDPHGHYHNSIWNSGNPLQSPSSLFFMQVSLITIATQFFDFCLRPLGQSSLVSYILGGVLFGPSILGHNKVLAHSLFPMRGALVLETIATFCLMFFYFICCMKMDPATMLKTEKQAITIGLSVFLFTLAIPTGLAFLLRQYVSMDKSLSEALPFIATSQSLTVFVSIVVLLTELKILNTDIGRLAMSASMFVDVISFPMTVLMFAIVQTVNIGGNILTLLWILLSIVGLLIVIIYVMRPTILWIVEHSEGKRVDDLCICCIFVFILFTGFFSEFIGQHFAMGPILLGLVVPEGPPIGTTLQTKLETICEAFLYPIYLAVNGLQTDIFKVDIQSMWIVGLVIIVAFLVKIGAVMLPGYYFNVPMKDCCVIGLLLNGRGIAEITIYNTLKGSKQLSEQEFTLMMVSIVVVNAIITPLIKFLHDPSEQYHTGRRSSIQHTKRDSELRVMVCVYENENIPTILNILEASYASSESTVAVIALVLVELLGRARPILISHQPQDIVRSNSFNYSTQIDNALRQYAQVNEGYATVQSFTSISDFNTIHDDVCRIALDRRANILIIPFHKRWEIDGSVEVTNRGIQTMNLKVLERAPCSVAILIDRGVLSSSPSLLLARSMYYVAVFFIGGADDAEALAYGSRMARHECVSVSVVRFLLFGEENSKDRKRDSDLVDEYRYYNAGNRRFEIMDEVVKDGIEMSSRITKLRDYFDLVMVGREHPQSVLLHGHDQWSECPELGVIGDMLASQDLVTKASVLVVQQQRIGGRLVKHTMNPLPNQRDQMVLPEEADILCTHPMFGPVSGKDGWKELTFMYEKVRIRDEPTCSKFLRIFATEGCKMVEMSCEEHDKAAAKSQFITHTIGRTLAEMDIKSTAIDTKGFETLVQLKETVKGCSFDLYSGLFVHNRFARQELENLEHALYKVKEMLAQRMHEEQGP. 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g02282 939 Gene3D - 772 851 - -
Seca5g02282 939 Gene3D - 33 437 IPR038770 -
Seca5g02282 939 PANTHER CATION/H + ANTIPORTER 13 766 - -
Seca5g02282 939 Coils Coil 908 928 - -
Seca5g02282 939 Pfam Sodium/hydrogen exchanger family 47 425 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g02282 Seca-Chr5 64084668 64092105 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g02282 3 764 Antiporter Super Family AT2G13620 35.868 1.37e-155 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g02282 K26731 - gmx:100779700 1083.55