Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g02272 ATGCTTGCAGGTGCTGGATTGTTGTGGATGGGGTGGTCAGGGTTCAATGGTGGAGCACCATATGTAGCCAACATTGACTCTTCTATTGCTGTGCTAAACACTAACATATGGAGCTGTTCAGGGTATGATGACAGGACTTGTTTGCATCACCCCAGGAGCAGGGGACTTGCTGCTTACCATTTTTATGGTAACTATTGTGGAGTCAAGTGGAAGATATATCTGCCAGGAAGGCAAAATAAAAAGAAAAACATTACCTACAGTTTTAACCCTAGGTAA 276 0.4348 MLAGAGLLWMGWSGFNGGAPYVANIDSSIAVLNTNIWSCSGYDDRTCLHHPRSRGLAAYHFYGNYCGVKWKIYLPGRQNKKKNITYSFNPR. 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g02272 91 SUPERFAMILY Ammonium transporter 2 42 - -
Seca5g02272 91 Gene3D Ammonium transporter AmtB like domains 1 42 IPR029020 -
Seca5g02272 91 PANTHER AMMONIUM TRANSPORTER MEP2 1 41 IPR001905 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g02272 Seca-Chr5 63908369 63909845 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g02272 9 36 Inorganic Solute Cotransporters AT2G38290 85.714 1.98e-11 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g02272 K03320 - gmx:100798599 76.6405