Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g02268 ATGGCGAATTCTTCACGAGGTAACGGAACGATCTCAATTTATAATGATCCCGAAGGACGGTGGCACATTTGTGTCACAAATGATAGAAATGTGGGCTCTTTTGGCATTTTCTTTGGGGATAGTCCATTCGATTTTGTGCTTCCTGCAACGTTGTTCCAAATGTTCATTGTTACCTTAACCTCTCGAACGCTTTACTTTCTTCTCAGGCCAATAAGAACACCCAAATTCATTTGCAACGTCTTGGGTGGCATTCTTATAGGGCCATCATTTCTGGGGCGCCAAGAGGCATATTGGAAGGCTTTGTTTCCAGTAAGACAGGCAGAGTTTTTAATCTTGATGTCATTACTGGGCGCTGCATATTTTTTGTTCATGATTGCACTGAAAATGGATGTACTAATGACTCTAAGAGCAGCCAAAAGTACTTGGAGACTTGGAATTATACCTTTTCTGGCTTCTTTTGGGGTTTTGTCAGCACTCTTACATATTTTTTTTCAACCACAAAACTTGCCTTATCGAAAATTACCAATTGCTCGTGCCGCAATAAGTTCTGCAATGGCAGTTAGTAACTTCCCTGTGGTGTCTGAAGCATTGATTGAACTAAATCTGATAGCCACAGAACTAGGACAAATTGCTTTGTCATCAGCCATGATTAATGACATCATACAATGGTTAATTATAATAAGCAATCGTTTTCTAGAGGCAAAAGAAATGAATCAAGCAATGATACATTGCGTGTGCTTGTTCTCCTTCATATCTTTTAACATTTTCATTACACGACCCACAATGAAGTTGATTGCTCATAGAACGCCAGTTGGGAAACAGGTGAAGGAAATTTACATTGTGTTCATACTTCTAGGAGTCCTAGTTATGGCTTGTGTCAGTGACGTGATTGGCGTAACATTTCTTATGGGACCATTGATTTATGGTTTGGTCATACCTAGTGGGCCCCCATTAGGCACAACATTGGTGGAGAAGTCTGAATCTGTCATCTCAGAGTATTTGCTTCCTTTCTTCTTTGTATATATAGGCATGAACACAAATTTGTCACAACTCCCAAATTTGCAAAGGTTTATAACTATGCAGTGTATCTTTTTTGCGGGAGGCTTGGCAAAATTGGTTGCATGTTTGTTGGTTTCTATGACTTACGGAGTTAAGGCTAAACATGGTTTAGTGCTTGGCCTCATCTTGAACGTCAAGGGCATAACTGAACTTATAGCTTTCGCTAGGCTTAGGAAAATCCATCTGTTGGATGAGAAAACGTTCAATGACTTAGTGTTCTCTGTGGTGGTTATGACCGCAATTGTCACACCCTTAGTTAAATTCTTTTACAGGCATCATCCTCGAGTACTAAACACATCAAGCATGTATGAAGGGCAAATAAGAACGATCCAAAACACTCCTAGAAATACGGAGTTTCGCATTATTACTTGTGTACACAGTGAAGGAAATGTGCGTGGCATCACTACCTTGTTGGAAGCTTTTAACCCTATCATAGAAAGCCCTATGTGTGTCTATGTGATACACCTCATTGAACTCTTAGGGAAAAGTGCACCCATTCTCCTTCCTATAAATTACAAGCAAAACAAAAAGTTCCTCTCTGTTAATTACCCAAACACGAATCACATCATGCGTGCATTTGAGAACTATTCCAACAGCTCTAGTGGTCCAGTTACTATTCTTCCATATGTCAACGTGGCACCTTACAAGAACATGCACAATGCAGTGTGCAACCTTGCCCAAGACAAGATGGTCCCTTTGCTTATCATACCTTTTCATGAAAATGACCATATTGACCTTAACGGCCACGTGGCTACCTCCATTCGCAAACTGAACGCTACATATCAAGCACGTGCGCCATGCACGTTGGGGATACTCGTGGACAGATACTCACAGTTAGGTGCCCATAATGACTCCAAGATGTATTTTCATGTGGGGATTTTCTTTGTGGGTGGACCAGATGATAGAGAAGCATTGGCCTTGGGTATTCGAATGTCAGAGAGACCAAATATGAGGGTGTCCTTATTTCGATTCATCTTGATTAACAATAATAAACTATGTAAAAGTAGAATGCAGGTAGAGGAGGAAGATAGCTTGTTGGATGAGAGCTTAATTGATGAGTTCAAGGGGAACAGGTTTGGGGGTGGGAATGTTTCTTGGTTTGAGATCATTGTGGAGGATGGGGTAGAGATATTGGATGCAATTCGTGGTTTGGAAGGAAACTATGACCTTGTAATGGTAGGCAGGCGCCATAATATTGGATCTTTGAATGATGAGGAAATGGCAATTTTCCTTGAGAATGCCGAGAATTTGGGAATATTTGGGGATATGTTGTCATCAACGGATTTTTGTATTGGGATGGTTCCAGTCTTAGTGACACAATGTGGTGAGGGTGGTGTTCTCCTGGGGCCAACATTTTTGGGACGCAACCGTCAATTAATGGAAGTTTTGTTTCCATTGAAACAATCTGCAATTTTAATAATATTGGCGAAAGTAGGTGCTACATATTTTGTGTTCATCAATGCATTGAAAATGGATGTAATCACGTCCTTAAAAGCAGCGAAACATAGTTGGCGATTTGGTGTAATTCCATTTTTCGCTTCTTATTTGGTTACAATAACCCTCATGATTTTATACAGGCCACATCTTGAAGGCATAACAGGTCCAGCATATTCGATCCCGAACGTATTCACCGTAAGTAGTTTCGCCGTTGTTTCTGAAGCCTTGACAGAACTCAACCTTATTACTACGGAACTAGGACAAATTGCTTTGTCTTCAGCCATGATCAGTGAAATAATGCAATGGGCTACTATAACACTCCAATTCAACTCAGAAGGGGACTTTATATATTCAGTTGGATTTATGGCTTGTACCTCATTATTCATTGTATTGTTATTTGTGCTTATTCAACCAGCGATGAAGAGTATTGCTCGAAGAACACCAGTAGGGAAACCAGTAAATGAAATGTATATTGTCATGATACTTCTCGGCGTGTTAATTATGGCTACGATTGGCGATACCATTGGCTTGAATTTCATTGTAGGGCCCACACTTTTTGGTTTGGTTATGCCAAATGGACCTCCCTTGGCAACAACAATTATAGAGAGAAGCGAACTTATCATCTCAGAATTGCTCATGCCTTTCTTCTACATAAATGTAGGAATTACCACAAATTCACTTGGAATTCATAACCACTGGAAGGGTTCTGTAATTTTCCTGGGTATCTTATTTCTGGGATTCTTGGCAAAGATCATTTCATGCGTGCTCATAGCTCCTTCATGCAATATAAGGCTAAAACACGGTGTGGTGCTTGGGCTCATACTAAACATCAAGGGAATAGTCGAGCTCATATATTTTTCAAGAATCAAAAAAGCTGTGCTTATTGATGAAGAAATATATAGTCAAATGGTGCTCTATGTCGTGGTGATTACCTCAGTTTGCATACCCTTGATCAGAAACATGTATAAGCATCGCTCTCGTGTTTTGACAACACCAAGCATACATGAAAGACGTGTGAGGACGATCCAAAGCAGTCCTGAAAACACAGAGTTCAATATCATTTCTTGTTTACACAATGATGCAAATGTGCATAGCATGATTGCCATGCTTGAGATATGTAACCCAACCATAGAAAGCCCCATATGTGTCCATGTGATCCATTTCATTGAGCTATTAGGGAAAAGCACACCTATTCTTCTTCCTATGAACATCCAGAATAAGAAATCCCCCCTCTCTATCAATTACCCTAACACAAATCACATTTTGCGTGCCTTTGAGAACTACTCCAAAAACTCCCAAGGCCCTGTCACCATTTTTCCATATGTCAATGTTGCCCCTTATAATAGCATGCATGAGGCCATTTGTAACCTCGCTGAAGACAAGTCAGTGCATTTCCTTATTATCCCCTTTCATGAAAATGATCAAAGCTTCGGTAGCGACATTGGTACCTCCATTCGCAACCTCAACTCTAGCTTTCAAGCAACGGCAAGTTGCACAGTGGGAATACTTGTGGATAGATACTCAGAACTAAGTATGAGCACCTCCAAGTTATGTTTTCATGTAGGCATCTTCTTTCTAGGTGGACCAGATGATAGAGAAGCACTAGCATTGATCATTCGAATGATGGATCGCACGAATATGAAAGTTACATTGTTCAAGTTTGTCATGAATAACAACAATTCAAGTGTTGCTATAGATAAAATATTGAAAGGAAATGAAGAAGAAGAAGAAAATTTTGAGACCACCTTGGATGAAAGCTTGATAGATGAGTTCAAGGCAAAGAAAATTAATAAGGATGATGTTATTTTCCATGAGATATTGGTGGATGACTGCATACAAGTGTTGGAAGCTATTAGAGGTCTAGAGAGCAATGATTATGACCTCGTGATGGTGGGTAAGAGACATAACATGGGGGATTTGACAGATGAAGAAATGTCAAATTTCATGGACAATGCAAAGCAGTTGGGAATTTTTGGTGATATGTTGGCATCCACAGAGTTTTGTAATGGGAGAGCTTCGGTCTTGGTGATGCAATGTGGTGAGAAACGAGTAAACTATTTTGAGTAG 4563 0.4002 MANSSRGNGTISIYNDPEGRWHICVTNDRNVGSFGIFFGDSPFDFVLPATLFQMFIVTLTSRTLYFLLRPIRTPKFICNVLGGILIGPSFLGRQEAYWKALFPVRQAEFLILMSLLGAAYFLFMIALKMDVLMTLRAAKSTWRLGIIPFLASFGVLSALLHIFFQPQNLPYRKLPIARAAISSAMAVSNFPVVSEALIELNLIATELGQIALSSAMINDIIQWLIIISNRFLEAKEMNQAMIHCVCLFSFISFNIFITRPTMKLIAHRTPVGKQVKEIYIVFILLGVLVMACVSDVIGVTFLMGPLIYGLVIPSGPPLGTTLVEKSESVISEYLLPFFFVYIGMNTNLSQLPNLQRFITMQCIFFAGGLAKLVACLLVSMTYGVKAKHGLVLGLILNVKGITELIAFARLRKIHLLDEKTFNDLVFSVVVMTAIVTPLVKFFYRHHPRVLNTSSMYEGQIRTIQNTPRNTEFRIITCVHSEGNVRGITTLLEAFNPIIESPMCVYVIHLIELLGKSAPILLPINYKQNKKFLSVNYPNTNHIMRAFENYSNSSSGPVTILPYVNVAPYKNMHNAVCNLAQDKMVPLLIIPFHENDHIDLNGHVATSIRKLNATYQARAPCTLGILVDRYSQLGAHNDSKMYFHVGIFFVGGPDDREALALGIRMSERPNMRVSLFRFILINNNKLCKSRMQVEEEDSLLDESLIDEFKGNRFGGGNVSWFEIIVEDGVEILDAIRGLEGNYDLVMVGRRHNIGSLNDEEMAIFLENAENLGIFGDMLSSTDFCIGMVPVLVTQCGEGGVLLGPTFLGRNRQLMEVLFPLKQSAILIILAKVGATYFVFINALKMDVITSLKAAKHSWRFGVIPFFASYLVTITLMILYRPHLEGITGPAYSIPNVFTVSSFAVVSEALTELNLITTELGQIALSSAMISEIMQWATITLQFNSEGDFIYSVGFMACTSLFIVLLFVLIQPAMKSIARRTPVGKPVNEMYIVMILLGVLIMATIGDTIGLNFIVGPTLFGLVMPNGPPLATTIIERSELIISELLMPFFYINVGITTNSLGIHNHWKGSVIFLGILFLGFLAKIISCVLIAPSCNIRLKHGVVLGLILNIKGIVELIYFSRIKKAVLIDEEIYSQMVLYVVVITSVCIPLIRNMYKHRSRVLTTPSIHERRVRTIQSSPENTEFNIISCLHNDANVHSMIAMLEICNPTIESPICVHVIHFIELLGKSTPILLPMNIQNKKSPLSINYPNTNHILRAFENYSKNSQGPVTIFPYVNVAPYNSMHEAICNLAEDKSVHFLIIPFHENDQSFGSDIGTSIRNLNSSFQATASCTVGILVDRYSELSMSTSKLCFHVGIFFLGGPDDREALALIIRMMDRTNMKVTLFKFVMNNNNSSVAIDKILKGNEEEEENFETTLDESLIDEFKAKKINKDDVIFHEILVDDCIQVLEAIRGLESNDYDLVMVGKRHNMGDLTDEEMSNFMDNAKQLGIFGDMLASTEFCNGRASVLVMQCGEKRVNYFE. 1521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g02268 1520 Gene3D - 794 1161 IPR038770 -
Seca5g02268 1520 Gene3D - 48 449 IPR038770 -
Seca5g02268 1520 PANTHER CATION/H + ANTIPORTER 30 793 - -
Seca5g02268 1520 FunFam Cation/H(+) antiporter 15 49 449 - -
Seca5g02268 1520 Pfam Sodium/hydrogen exchanger family 55 439 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Seca5g02268 1520 Pfam Sodium/hydrogen exchanger family 798 1145 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g02268 Seca-Chr5 63863320 63872451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g02268 35 793 Antiporter Super Family AT2G13620 33.376 1.50e-134 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g02268 - - gmx:106794183 1072