Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g02258 ATGAGGCAAGGGGTCTCCTTCAGGAGCATGTCACTGCATAAACAATGCAAGTTGGTGTCATCATCTAGCAGCAGAATAATGTTAGTGGGATTTGCAGTTCAAGGCTTCCAGCCTTCAAGGATACAAGATGATGGAACTGAGTTGGTTCGTTTGGCTTCCACTTTGTTGGGTTGCTTTTCAAAGGATAATGCTGGATCTGTCCTTGGAAGGATGAACATCAAGGCTTGGATGGCTTTTGTCCCTCTTTGGCTCATTTTCTCTTACACTGTTGGACCAAGGGCGAAGAGTGACAGGGAGAGGTTCCCACCAAAAAATGTGTTGCTTATGCTTGCAGGTGCTGGATTGTTGTGGATGGGGTGGTCAGGGTTCAATGGTGGAGCACCATATGTAGCCAACATTGACTCTTCTATTGCTGTGCTAAACACTAACATATGGAGTTGTTCAGGGTATGATGACAGGACTTGTTTGCATCACCCCAGGAGCAGGTGTAAGCTTAATTGTGATTAA 507 0.4556 MRQGVSFRSMSLHKQCKLVSSSSSRIMLVGFAVQGFQPSRIQDDGTELVRLASTLLGCFSKDNAGSVLGRMNIKAWMAFVPLWLIFSYTVGPRAKSDRERFPPKNVLLMLAGAGLLWMGWSGFNGGAPYVANIDSSIAVLNTNIWSCSGYDDRTCLHHPRSRCKLNCD. 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g02258 168 SUPERFAMILY Ammonium transporter 64 150 - -
Seca5g02258 168 Gene3D Ammonium transporter AmtB like domains 84 150 IPR029020 -
Seca5g02258 168 Pfam Ammonium Transporter Family 84 144 IPR024041 GO:0008519|GO:0016020|GO:0072488
Seca5g02258 168 PANTHER AMMONIUM TRANSPORTER MEP2 88 149 IPR001905 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g02258 Seca-Chr5 63758276 63761446 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g02258 48 144 Inorganic Solute Cotransporters AT2G38290 56.204 7.17e-33 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g02258 K03320 - gmx:100798599 136.732