Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g02231 ATGGGAAGTTCAGTGCGTGTTAAAGAAGCTGTGCTAGTGACCCCTTCAGAGCCCACCCCGAGTGGTGTCCTCTTACTTTCAGCACTTGACTCTCAACTCTTTCTTCGCTTCACCATAGAGTATCTGTTAGTCTACAGGCCCGGCCCGGGCCTCGACCAAGGTACCACCACCGCTCGGTTAAAAGCAGCATTAGCAAAAGCGTTGGTTCCTTATTACCCATTGGCAGGGAGGGTTCGGGCCAGACCTGATGGCTCGGGCCTGGAAGTGCTTTGTCGAGCCCAGGGTGCGGTCTTCATCGAAGCCTGTTCAGACCGTTACACCGTCAACGACTTCGAAAAAGCCCCGAAAACGGTTACTCACTGGAGGAAACTCTTGTCGTTTAACGTCACCGATGTTCTCAGCGGATCGCCGCCGCTTGTCGTTCAGCTAACATGGCTCGCCGATGGAGCTGCCGCCGTCGGCGTCGGAATCAACCACTGTATCTGCGATGGAATCGGAAGCGCGGAATTTCTCAATTTCCTTGCTGATTTAGCTTCTGGTAAACGTGGTGATCCTAAACCCAAACCCGTTTGGGATCGCCACCTTCTAAACCCACCGAAAACGAAGATGACTCGGGCTTTTAACCCGGCGAGTCACCCCGAGTTCAACCGGGTCCCTGATCTCTGCGGGTTCATGAACCGGGTCACGAGTAGTCTCAAACCAACATGCATTGTGTTCGACAAGAGGAGACTCAACGAACTCAAGAGCGTGGCTCGGTGCACGAGTCAACCCGGCGAGTCGTACACGTCCTTCGAGGTGCTCGCTGCACACGTGTGGAGGAGCTGGGCGAGAGCAATGGGGTTCCCACAGAACCAGACGCTGAAGCTTCTTTTCAGTGTGAACGTGAGGAACCGGGTCAAACCGGGTTTACCCGACGGGTACTACGGGAACGCGTTTGTTTTAGGGTGTGCGCAAAGCAGCGTTAGGGAACTTTCGGAGCGAGGGGTCGGGTACGGGTCGGGTTTGGTGAAGAGAGCGAAGGAGAGGGTGGACGGGGAGCACGTGAGGAGAGTGGCTGAGTTGGTGTCCGAGTCGAGAGCGATTCCTGACTCGGTTGGTGTGCTTATATTGTCGCAGTGGTCAAGGATGGATCTTGAGAGGGTTGAATTCGGAATGGGGAAACCGGTTCATGTGGGACCCATTTGCTGCGATAGGTACTGTTTGTTTTTGCCGGTGAAGGGTGAAAGGGATAGTGTTAAGGTCACGGTGGCGGTTCCCGCCGCCGCCGTTGACAATTACCACCGTTTCCTCAGGGAATCGCTTTTATGA 1308 0.5489 MGSSVRVKEAVLVTPSEPTPSGVLLLSALDSQLFLRFTIEYLLVYRPGPGLDQGTTTARLKAALAKALVPYYPLAGRVRARPDGSGLEVLCRAQGAVFIEACSDRYTVNDFEKAPKTVTHWRKLLSFNVTDVLSGSPPLVVQLTWLADGAAAVGVGINHCICDGIGSAEFLNFLADLASGKRGDPKPKPVWDRHLLNPPKTKMTRAFNPASHPEFNRVPDLCGFMNRVTSSLKPTCIVFDKRRLNELKSVARCTSQPGESYTSFEVLAAHVWRSWARAMGFPQNQTLKLLFSVNVRNRVKPGLPDGYYGNAFVLGCAQSSVRELSERGVGYGSGLVKRAKERVDGEHVRRVAELVSESRAIPDSVGVLILSQWSRMDLERVEFGMGKPVHVGPICCDRYCLFLPVKGERDSVKVTVAVPAAAVDNYHRFLRESLL. 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g02231 435 Gene3D - 2 216 IPR023213 -
Seca5g02231 435 Pfam Transferase family 4 423 - -
Seca5g02231 435 Gene3D - 225 429 IPR023213 -
Seca5g02231 435 PANTHER ACYL TRANSFERASE 4 4 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g02231 Seca-Chr5 63293924 63295231 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g02231 5 432 Monolignol Biosynthesis Gene Families AT5G48930 27.803 3.77e-48 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g02231 - - psat:127083994 670.233