Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g02201 ATGGTTCTTGATTTCAGAACAAGGCTAGAGATCCAAGCTGATTCTGCATGTGTGGACCTGAGGTCCAGATGTCCATTCTTTTATGAATTTGGTTGCAAGATAGCCCCCATAGTTGGCGACAGAACCATCGGGTTTCTGTTGTTGTCTGCATTTAAAAGTAGGTACAAGGAAGTCCTCACGAAGGCACATACTTTAGCATTTGCAGCTGGTTCCAAATTTTGGACTATTCTGACGAAAGAAGAGATCAATTTGTATGAGACAGCTCAATCCGCAATGGCATCCTTCAAGAAGTGGCGAATGGGGGGGCCCAGATTTCAGATAGCTTCTGTTCTCGGAAGAAAGAGAAAACCAACTGAATAG 360 0.4389 MVLDFRTRLEIQADSACVDLRSRCPFFYEFGCKIAPIVGDRTIGFLLLSAFKSRYKEVLTKAHTLAFAAGSKFWTILTKEEINLYETAQSAMASFKKWRMGGPRFQIASVLGRKRKPTE. 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g02201 119 PANTHER UNCHARACTERIZED 6 118 IPR010492 -
Seca5g02201 119 Gene3D - 2 100 IPR038437 -
Seca5g02201 119 CDD GINS_A_psf3 6 101 - -
Seca5g02201 119 SUPERFAMILY GINS helical bundle-like 6 100 IPR036224 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g02201 Seca-Chr5 62072121 62075203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g02201 4 116 Core DNA Replication Machinery Family AT3G55490 68.142 8.52e-54 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g02201 K10734 - gmx:100799874 209.534