Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g02198 ATGGAGGGACATATGGCGGAAGCAAAGATATGCCAGAAGTACAGCAAAACATGGTCAGGGTGGTGTGGCAACTCTAACCACTGTGACAACCAGTGCAAGAAATGGGAAGGTGCAAAGTTTGGATCATGTCACTATGATTCACGTGGACGGGCCTGTTTCTGTTACTTCAATTGTCCAGGTTTATGTGCCAAGCGCAGCAAAACATGGTCTGGGATATGTATAAGCTCCAAAAACTGTGACAAGCAATGTAGGACTAAGGAAGGTGCCAGCCACGGAGCATGTCATGGTAGCCTCTCTGGACGGGCTTGTGACTGTTACTTCAAATGTTAA 330 0.4697 MEGHMAEAKICQKYSKTWSGWCGNSNHCDNQCKKWEGAKFGSCHYDSRGRACFCYFNCPGLCAKRSKTWSGICISSKNCDKQCRTKEGASHGACHGSLSGRACDCYFKC. 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g02198 109 Pfam Gamma-thionin family 9 58 - -
Seca5g02198 109 Pfam Gamma-thionin family 61 109 - -
Seca5g02198 109 PANTHER DEFENSIN-LIKE PROTEIN 1 6 55 - -
Seca5g02198 109 SUPERFAMILY Scorpion toxin-like 61 109 IPR036574 -
Seca5g02198 109 SMART gth_4 10 58 IPR003614 GO:0006952
Seca5g02198 109 SMART gth_4 61 109 IPR003614 GO:0006952
Seca5g02198 109 Gene3D - 61 109 IPR036574 -
Seca5g02198 109 Gene3D - 10 58 IPR036574 -
Seca5g02198 109 ProSitePatterns Gamma-thionins family signature. 9 32 IPR008176 GO:0006952
Seca5g02198 109 SUPERFAMILY Scorpion toxin-like 8 58 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g02198 Seca-Chr5 62026984 62028730 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g02198 2 58 Plant Defensins Gene Families AT1G19610 56.140 6.94e-19 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g02198 - - psom:113336667 118.627