Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g02195 ATGTGGGCAATTGTATATCTGGCGCAGATGAAACCACTCATAGTACCTATACTGAATGAGGATGTAGCTTCTTGTAAGTTAGAGAATATGGATCACAGATTGGTTGCTGGACAGAATTTAGTATCAGCTCTCATGAATCGTTTAGTATTTTCTAATGGTGGTTCTGTATGTATTTCTTGTTGGATAATGGCATTTCTATTGCTGCCTGAGTTGTTGTATTTAGCCCTCATTCATTTCAGATGTCTGTAG 249 0.3775 MWAIVYLAQMKPLIVPILNEDVASCKLENMDHRLVAGQNLVSALMNRLVFSNGGSVCISCWIMAFLLLPELLYLALIHFRCL. 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g02195 82 Pfam ATP synthase subunit H 1 19 IPR008389 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g02195 Seca-Chr5 61999499 61999769 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g02195 1 21 Primary Pumps ATPases(2) AT5G55290 80.952 2.10e-06 39.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g02195 K02153 - egr:120294723 44.2838