Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g02194 ATGGATCATTTTGATCCATATGAGAAGCGAGAAAAAGTTGCAGGATGTTACCAAACAGTTGTGTCTAATCCCAATGCAATATGGCAAAGTGAAAGCGTCCTAACGTACTACCTTCCTGCCTTTGCCACCCAAGTTGCTGGCATGTTGATCTCCACTCGTTGTTTATACTTCATCCTTAGACCCTTACACCAACCTCGTATTGTTATTGAGATTTTGATGGGTTTCATGATAAGTCCAGAAGTGCTTGGGTCAACTCCTATGTTTGAAGTTTTAGTCCCTCTAAAATCAGTCATATCAACTGAAACCATGTCATATATGGGACTCGTTTACTATGTCTTCCTTGCTGGCTTGGACATGAACTTGGACACTATTCTAAGAGCAAGAAAGAAAGCTACAACCATAGCTATTTCAGGCATTGTAATTCCAATGGTAATGGGGGCTGGAATATATGCATTACTTCAAAGTATGTATGAGGCACCTTCTGAGTATGTGGCACATCACAGCAGACCTAAGGCATATTTGTTCTGGGCCTTAGTTTTTAGTGTCACAGGTTTTCCTGTGGTTACTCAAATCCTTGCAGACCTCAAGCTCCTCTATACAGGTCTGGGAAGGGTGGCCTTAACAGCAGCTATGATTACTGACTTCTATAATTGGGTCATATTTGCACTGTTGATTCCATATGCTCTTAATGAAGGAAGTCCCATGTATTCTGTGCTCAGCACCATAGTTTTTGTCCTTTTTTGCTTCATTGTGGTACGCCCTTATCTGGTGCAGTTGATAGTTAGAAAAACCAATCAGAATGAGTGGGACAACTACCAAATGTTCTGTGTGATGATGGGGGCTTTTGCTTGTTCAACAGTCACAGATCTCCTTGGGACACACCCTGTTGTTGGGGCTCTCATGTATGGAATAATGATACCTCGTGGGAAATTTACTGAAATGCTGAAAGATAAGACAGAGGATTTTGGGGTTGTTTTTCTGGGTACACTCTTCTTTGGTAACTGTGGCATAAGACTCAGAATAATATCTGTTATACAAACACAAGGTTTTCTCCTGGTGCTGGCAATTATGCTCTTGACATGCATACCAAAGATTTTAAGCATTGTGATAGCAACACAATTCTTTGGTATGCCTGCTCGGGATAGTGTGGCAATTGGACTACTTATGAACACCAAAGGTGTCTTACCATTTATAGTGCTCAACATTGCCTGGGACAAACAGGTTATTAGTGTGGAGTCCTACTCAATTTTGACAACATCTGTTCTTGTAATGACAATAATGGTGCCTCTTATCATCAATGCCATATACAAGCCAAGAAAGCTATATAAGCAAAATAAGCTAAGGACTATACAGAATTTAAAGGCTGAAGCAGACCTCAGAGTTTTGGCTTGTGTTCACAACCCTCGCCAAGCCACAGGAATGATCAGCATCCTTCAAGCCTGCAATGCTGTTAAACTCTCCCCTTTACGTGTGTTTGCTCTTCAGCTTATTGAATTAACTGGAAATAACACTTCCCTTTTGGCTGCACACCTTGATCAGCCAAACCAGCAGCAGAATGGAGAACAAGCCCTCACACAAACACAACATGATATGGAAATCATCACCAACACTTTTGAAGCTTTATGTTCTGCTGATAATCAAAACACTAGAGTTGAGACACTTGCTGCGGCTTCCACCTATTCAACCATTCATGAGGATATATACACTTTGGCACAGGAGAAGCAAGCAACCTTGATTCTCCTTCCATTTCATAAGCAATCAAGCATAGAAGGTGTTCTAGAGATAACCAACAGTGCATTTAAGCACATAAACCAAAATGTCATGAAAGATGCACCTTGTTCTGTGGCAATCTTTGTTGATCGTGGTCTTGGGTCATTGTTCAAAGTGAACTTGCGTGTCATTATGGTTTTCATTGGTGGTCCTGATGACCGTGAAGCCTTAGCTGTTGCATGGAGGATGTCAAAGCATCAAGGGATTCAACTATCAGTGGTGAGGATTCTTTTGTTAGGGGAGGCTGCAGAAGCAGATACAACACCCCAGTTAGAATCTCGAGGGCTATTGTCTGCAGTAGTAGACTATGAAAGGCAAAAGGAATTGGATGATGAGTATTTGAGTTTATTTAGACTGCATGCAGTGAACAAAGAGGATTCTATAACATACTCAGAAAAAGAAGTTAACTCACGTGATGATATTGCTGAAGTTCTAAATCAAATAGACCAAATTGGGTGTGATTTGTACATTCTAGGACAAGGGACAGGTAGGCACTCTTTGGTCTTGTCAGAGTTAATGAAATGGACTGATTGCCCGGAACTTGGAGTTATAGGGGACATGATGGCATCAAACAATTTTGGTTCATCCTCTTCACTCCTTGTTGTACAGCAATATGGGTTTGGGGGAATGGTATTTGATACTACCACTCAGAATCCTAGTGAAGTGCCAGCAAACAATGATGGTTCAGATGCACATTTTGTGAAAATAGAATAG 2484 0.411 MDHFDPYEKREKVAGCYQTVVSNPNAIWQSESVLTYYLPAFATQVAGMLISTRCLYFILRPLHQPRIVIEILMGFMISPEVLGSTPMFEVLVPLKSVISTETMSYMGLVYYVFLAGLDMNLDTILRARKKATTIAISGIVIPMVMGAGIYALLQSMYEAPSEYVAHHSRPKAYLFWALVFSVTGFPVVTQILADLKLLYTGLGRVALTAAMITDFYNWVIFALLIPYALNEGSPMYSVLSTIVFVLFCFIVVRPYLVQLIVRKTNQNEWDNYQMFCVMMGAFACSTVTDLLGTHPVVGALMYGIMIPRGKFTEMLKDKTEDFGVVFLGTLFFGNCGIRLRIISVIQTQGFLLVLAIMLLTCIPKILSIVIATQFFGMPARDSVAIGLLMNTKGVLPFIVLNIAWDKQVISVESYSILTTSVLVMTIMVPLIINAIYKPRKLYKQNKLRTIQNLKAEADLRVLACVHNPRQATGMISILQACNAVKLSPLRVFALQLIELTGNNTSLLAAHLDQPNQQQNGEQALTQTQHDMEIITNTFEALCSADNQNTRVETLAAASTYSTIHEDIYTLAQEKQATLILLPFHKQSSIEGVLEITNSAFKHINQNVMKDAPCSVAIFVDRGLGSLFKVNLRVIMVFIGGPDDREALAVAWRMSKHQGIQLSVVRILLLGEAAEADTTPQLESRGLLSAVVDYERQKELDDEYLSLFRLHAVNKEDSITYSEKEVNSRDDIAEVLNQIDQIGCDLYILGQGTGRHSLVLSELMKWTDCPELGVIGDMMASNNFGSSSSLLVVQQYGFGGMVFDTTTQNPSEVPANNDGSDAHFVKIE. 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g02194 827 Pfam Sodium/hydrogen exchanger family 48 435 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Seca5g02194 827 Gene3D - 456 771 - -
Seca5g02194 827 PANTHER CATION/H + ANTIPORTER 25 795 - -
Seca5g02194 827 Gene3D - 40 445 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g02194 Seca-Chr5 61968838 61971871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g02194 16 795 Antiporter Super Family AT2G13620 38.180 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g02194 - - gmx:100802381 1146.72