Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g02187 ATGGTTGCCAAGTGCCTGGTGAAAGATCAAACAAAGAGACCATCAGCGGAGAAGTTACTAAAACATCCCTTCTTCAAAAATGCTAAGCCTCCTGAGCTATCTGTAAAGAAATTGTTTGCTGACTTACCACCTCTTTGGAATAGTGTAAAAGCCCTCCAGCTTAAAGATGCAGCATTACTAGCAATGAAGAAAATGCCTTCTGCAGAACAAGAAGCAATATCTCAAAGCAACTTGAGTAAGCCTGCGCTTAGAGAGAAGGATTATGGCAAGACAAAAATGCGATACCCAGGCTACATAGAAATTGAATCAGGACTCCAATATAAGGATAATAATCTCCTTCTCTGTGATACCCACCCTCCTACTACTCTGACTGTGAGAGAGCCTTCAGTGAATGAATTTTTGTTTCCTGCTCAAAACTTGCTTTGGAGCAGGTCCCAATTATTCGCCAAGAACTTGCAAATCATATAA 468 0.4081 MVAKCLVKDQTKRPSAEKLLKHPFFKNAKPPELSVKKLFADLPPLWNSVKALQLKDAALLAMKKMPSAEQEAISQSNLSKPALREKDYGKTKMRYPGYIEIESGLQYKDNNLLLCDTHPPTTLTVREPSVNEFLFPAQNLLWSRSQLFAKNLQII. 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g02187 155 Gene3D Transferase(Phosphotransferase) domain 1 1 55 - -
Seca5g02187 155 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 79 IPR047173 GO:0043539
Seca5g02187 155 SUPERFAMILY Protein kinase-like (PK-like) 2 75 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g02187 Seca-Chr5 61880837 61883925 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g02187 1 76 MAP Kinase Kinase Kinase Kinase AT4G10730 77.632 1.40e-33 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g02187 - - lja:Lj0g3v0323609.4 128.257