Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g02172 ATGGCCAAAGAGATTCTTGTTTTGAGGAGGCATGATCACCCAAATGTTCTAAAGCTTGAGGGCTTAGTTACTTCAAGAATATCATCGAGTCTTTATTTGGTTTTTGAGTACGTGGAACACGATCTTGCTGGCCTTGCAGCTCGCCTTGGTGTCAAATTCTCTGAGCCTCGGTTGTTGTGA 180 0.4389 MAKEILVLRRHDHPNVLKLEGLVTSRISSSLYLVFEYVEHDLAGLAARLGVKFSEPRLL. 60
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g02172 59 FunFam Putative serine threonine-protein kinase 1 44 - -
Seca5g02172 59 Gene3D Phosphorylase Kinase; domain 1 1 51 - -
Seca5g02172 59 ProSiteProfiles Protein kinase domain profile. 1 59 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca5g02172 59 SUPERFAMILY Protein kinase-like (PK-like) 3 58 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g02172 Seca-Chr5 61574771 61574950 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g02172 3 58 Core Cell Cycle Gene Families AT5G10270 35.714 8.81e-11 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g02172 K08819 - gmx:100789359 100.138