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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Seca5g02164
ATGGATGAGGACATGTCAGGCTTTTGCATTAGAAGTGGAAGTGTTCGTGGTAACAACAATAGTGCAAGCACTGGCACTAAGTGTGGGCGTTGGAACCCCACAACTGAACAAGTTAAGCTTTTAACTGAACTGTTCAGTTCTGGACTCCGTACTCCAAGCACTGATCAGATTCAAAAGATCTCTACTCAGCTGAGTTTTTATGGTAAGATTGAGAGCAAGAATGTCTTCTATTGGTTTCAGAATCATAAAGCTAGGGAAAGACAAAAGCGTCGTAAGGTTTCCTTTGATGATAATAAGGATGTGATTCGTAGAGAAAATTCCAACTCCAAGTCCATCAATTCTTCTTCACAAACAGATTTTGCAAAGCTCTATCAGGTTTCAGAGCCAGAGAGGGTGATTGAGACTCTTCAACTCTTCCCTTTGAACTCCTTTGGTGAATCAGAATCAAAGAATTTGAGAGTCCATGCAAATGCAATGTTTTCATACACAATGGGGGAACAAATGGATCACCCTCCATTAGATCTTCGCTTGAGTTTTATGTGA
543
0.4052
MDEDMSGFCIRSGSVRGNNNSASTGTKCGRWNPTTEQVKLLTELFSSGLRTPSTDQIQKISTQLSFYGKIESKNVFYWFQNHKARERQKRRKVSFDDNKDVIRRENSNSKSINSSSQTDFAKLYQVSEPERVIETLQLFPLNSFGESESKNLRVHANAMFSYTMGEQMDHPPLDLRLSFM.
181
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Seca5g02164
180
Pfam
Homeodomain
28
88
IPR001356
GO:0003677
Seca5g02164
180
Gene3D
-
27
95
-
-
Seca5g02164
180
ProSiteProfiles
'Homeobox' domain profile.
24
89
IPR001356
GO:0003677
Seca5g02164
180
SMART
HOX_1
26
93
IPR001356
GO:0003677
Seca5g02164
180
SUPERFAMILY
Homeodomain-like
29
91
IPR009057
-
Seca5g02164
180
CDD
homeodomain
30
90
IPR001356
GO:0003677
Seca5g02164
180
FunFam
WUSCHEL-related homeobox 11
27
95
-
-
Seca5g02164
180
PANTHER
WUSCHEL-RELATED HOMEOBOX 1-RELATED
17
109
IPR044555
GO:0003700|GO:0099402
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Seca5g02164
Seca-Chr5
61370540
61371695
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Seca5g02164
8
180
Wox Gene Family
AT3G11260
54.211
3.28e-63
191
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
HB-WOX
Seca5g02164
Homeodomain
8.9e-18
CL0123
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Seca5g02164
-
-
pvu:PHAVU_008G226100g
273.092
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