LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca5g02099	ATGGACTTTAATAGTGATGATTCAGCTGTTAATCTGGATGATGATAGGGACGTAAGTTATAGTGACTCTTCTAGCAGTCATGAAATGACTAGTGGAAATGATATACATAGTGATGAAGGAAATGAGTCTATTCACCCAGAGGCTGATATGGATGAGGAGAATTATGTTATGGATACTGATGTTAGAGACGGTGTGTCAAGGAGGATAATTGACTTGACAACTGATGATATAAGGGCTTTGGAGTTCGCTAGTGAAGAGCATGCGTACAATTTTTACTTTTCTTATGCAAAATGTAAAGGATTTGCTATGAGGAAGGATGATGTTATTCGTGACAAAAAAAGGATGGTCATAATGCGGCAGTATTTATGTAGTAGGGCTGGTCTGAGGGACAAAAAGCATTTGATTAGGTTAGATCGAAAAAAGGAACACAGACCCCTTACCCGTACCAATTGTCTAGCAAAGTTGAGAGTTAGGTTTGATTACAAAATGGGTAAATGGAAGGTTGTTTCATTTGAAGAATCTCACAACCATGATTTAACCCCTGCAAAGTTTGTACCTCTAATTCCTAATTATAGGGGATTGACTGATGGGGACAAAGCCCAAGTGGATGCATTACATTCTCATGGCATTAGGCCTTGCCAGATTATGGGTTTTCTTGTTGATAAAAAAGGAGGGTATAGAAATGTTGGATTTTCAAAGAAAGATTTGTACAACTACATATATGAGGTTAAACGTGGTAAAATAAAAGATGGGGATGCTGTTGCTGGCTTAAGTTATTTGCAAGGAAAGGCGGATAATAATCCAATGTTTTTTTTCAAGATTTTTATGTTCTAA	834	0.3705	MDFNSDDSAVNLDDDRDVSYSDSSSSHEMTSGNDIHSDEGNESIHPEADMDEENYVMDTDVRDGVSRRIIDLTTDDIRALEFASEEHAYNFYFSYAKCKGFAMRKDDVIRDKKRMVIMRQYLCSRAGLRDKKHLIRLDRKKEHRPLTRTNCLAKLRVRFDYKMGKWKVVSFEESHNHDLTPAKFVPLIPNYRGLTDGDKAQVDALHSHGIRPCQIMGFLVDKKGGYRNVGFSKKDLYNYIYEVKRGKIKDGDAVAGLSYLQGKADNNPMFFFKIFMF.	278

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca5g02099	277	Pfam	FAR1 DNA-binding domain	90	180	IPR004330	-
	Seca5g02099	277	PANTHER	OS01G0519700 PROTEIN	79	274	-	-
	Seca5g02099	277	MobiDBLite	consensus disorder prediction	32	54	-	-
	Seca5g02099	277	MobiDBLite	consensus disorder prediction	1	54	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca5g02099	Seca-Chr5	59986304	59987137	Dispersed/Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Seca5g02099		FAR1	1.1e-20	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca5g02099	-		-	ccaj:109794460	285.419