Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g02084 ATGGATTGTAGGAGATCCTCTGCTCTTTTTCTGTTCCTCCTTTGCTTTACTTCATTTCTTCTGATATGTCACTCAACACCCCAACCTCCCCTGAAGAGTTACATTGTCTACACTGGTGACAGCATGAAGGATGAAGCTTCTGCATTGACCCTTTACACAAGCATGCTACAAGAAGTTGTAGACAGCAAAGCTGAATCGAGGTCTGTACTGCACCACTACAAACGTAGTTTCGGTGGCTTTGTTGTGGAGCTAACAGAGGAGGAAGCTGAAAGAATGGCTGGACTTGATGGAGTGGTGTCTGTCTTTCCTAATGAAAAGAAACAACTCCTTACAACAAGGTCTTGGGATTTTATTGGCTTTCCACTACAAGCACAAAGAGCAGCAACTGAAAGTAATGTCATCATTGGACTACTTGACTCTGGAATCTGGCCAGAATCAGAGAGTTTCAATGACAAAGGGTTCAGTCCACCACCTAGTAAATGGAAGGGCACTTGCCAAACTACTAATTTCACATGCAATAACAAAATTATTGGAGCTAAGTATTACAGAGCTGATGGGTCATTTAGCGATGAGGATCTAAAATCTCCAAGAGATTCAGATGGTCATGGAACTCATACAGCATCAACAGCAGCTGGTAACCCAGTTAGCACAGCTAGCATGTTAGGCCTTGCACAGGGAACAGCAAGAGGTGGAGCTATATCAGCACGTATTGCTGTCTATAAAGTGTGTTGGTTTGATGGATGTTTTGATGCGGACATCCTTGCTGCATTTGATGATGCAATTGCAGATGGGGTTGACATAATATCAGTTTCAATTGGAGGGTTCACTGATAGTAACTATTTCAAAGATGTATTAGGAATTGGAGCATTTCATGCTGTGAGAAGTGGAATATTGACAGTAACTTCAGCAGGGAATGGAGGTCCAAGACCTTCCTCTCTGTCAAATTTTACACCTTGGTCAATTTCTGTGGGTGCTAGCACCATAGACAGGAAGTTTGTAACCAAGGTTGAATTAGGTGACAACAGAACTTATGAGGGAATCTCAGTAAATTCATTTGACCTTAAGGGAGAATTGTATCCTATAATCTATGCTGGAGATGCACCAAACACTAAGGGAGGCTACGATGGATCTACATCCAGGTTTTGCTTCGATGATACGTTGGACGAAAATTTAGTTAAGGGCAAAATTGTTCTATGTGACATCAGAAGCAAAGCGGCAGGCCCCTTTTATGCTGGTGCTGTTGGGGCACTGATACAAGGACAAACTTCTAGAGATCTTACTCCTTCTCTTCCTTTGGCTGGATCTTACCTTGACTTGCATGATGGTCTCTCTGTATATGACTACATTAACTCTACAAGGTATCAACCAAATGCAACCATATTTAAGAGTGATGAGATCAAAGATACTTTGGCCCCTGTTGTGCCTTCTTTCTCATCAAGGGGTCCAAATATTGTTACACCTGACATTCTTAAGCCAGATTTAGTGGCTCCTGGAGTTGCCATTCTAGCTAGTTGGTCTCCTATTTCCCCTCCTTCTGATATTGAAGGTGATAACAGAACATTACAGTTCAATATCATCTCAGGGACATCAATGGCTTGCCCACATGTTTCTGGGGCAGCAGCTTACATCAAATCATTTCATCCAACATGGTCTCCTGCTGCTATTCGTTCAGCTCTAATGACTACAGCTAAACAGCTTAGCCCCAAGAATAACCGTGACAAAGAATTTGCATATGGCGCAGGCCAAATTGATCCTTCCAAGGCTATTTATCCTGGTTTAATATATGATGCTGGTGAAATAGACTATGTAAGGTTTTTATGTGGACAAGGCTATAGTTCAAAGACTTTAAAATTCATCACAGGGGATAATAGTAGCTGCCCTGAAACAACTTATGGTACAGCAAGGGATCTGAACTATCCTTCATTTGCTCTTCATGTCCCACCCTCCAATTCCACTGTAAGTGGAAGTTTTAATAGGACTGTTACAAATGTTGGTTCACCAACGTCCACATATGAAGCTATTGTGACTAATCCTCAAGGACTAAAAATTGAAGTGAACCCCAAGGTTCTGTCATTCACTTCTCTTGACCAAAAGAAAACATTTGTGCTCACAATTGAGGGAACATTAGAAGAATCTGTAGTGTCAGCCTCTTTGGTCTGGGATGATGGTAAACACCAAGTGAGGAGCCCCATTATTGTGTTTAATACACCATAA 2214 0.4178 MDCRRSSALFLFLLCFTSFLLICHSTPQPPLKSYIVYTGDSMKDEASALTLYTSMLQEVVDSKAESRSVLHHYKRSFGGFVVELTEEEAERMAGLDGVVSVFPNEKKQLLTTRSWDFIGFPLQAQRAATESNVIIGLLDSGIWPESESFNDKGFSPPPSKWKGTCQTTNFTCNNKIIGAKYYRADGSFSDEDLKSPRDSDGHGTHTASTAAGNPVSTASMLGLAQGTARGGAISARIAVYKVCWFDGCFDADILAAFDDAIADGVDIISVSIGGFTDSNYFKDVLGIGAFHAVRSGILTVTSAGNGGPRPSSLSNFTPWSISVGASTIDRKFVTKVELGDNRTYEGISVNSFDLKGELYPIIYAGDAPNTKGGYDGSTSRFCFDDTLDENLVKGKIVLCDIRSKAAGPFYAGAVGALIQGQTSRDLTPSLPLAGSYLDLHDGLSVYDYINSTRYQPNATIFKSDEIKDTLAPVVPSFSSRGPNIVTPDILKPDLVAPGVAILASWSPISPPSDIEGDNRTLQFNIISGTSMACPHVSGAAAYIKSFHPTWSPAAIRSALMTTAKQLSPKNNRDKEFAYGAGQIDPSKAIYPGLIYDAGEIDYVRFLCGQGYSSKTLKFITGDNSSCPETTYGTARDLNYPSFALHVPPSNSTVSGSFNRTVTNVGSPTSTYEAIVTNPQGLKIEVNPKVLSFTSLDQKKTFVLTIEGTLEESVVSASLVWDDGKHQVRSPIIVFNTP. 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g02084 737 Gene3D Peptidase S8/S53 domain 132 602 IPR036852 GO:0004252|GO:0006508
Seca5g02084 737 MobiDBLite consensus disorder prediction 192 212 - -
Seca5g02084 737 PRINTS Subtilisin serine protease family (S8) signature 130 149 IPR015500 -
Seca5g02084 737 PRINTS Subtilisin serine protease family (S8) signature 198 211 IPR015500 -
Seca5g02084 737 PRINTS Subtilisin serine protease family (S8) signature 527 543 IPR015500 -
Seca5g02084 737 Gene3D - 606 735 - -
Seca5g02084 737 CDD Peptidases_S8_3 107 563 IPR034197 -
Seca5g02084 737 ProSitePatterns Serine proteases, subtilase family, serine active site. 528 538 IPR023828 -
Seca5g02084 737 ProSiteProfiles Serine proteases, subtilase domain profile. 114 589 - -
Seca5g02084 737 Pfam Fibronectin type-III domain 636 733 IPR041469 -
Seca5g02084 737 Pfam Peptidase inhibitor I9 33 108 IPR010259 -
Seca5g02084 737 Gene3D - 329 467 - -
Seca5g02084 737 SUPERFAMILY Subtilisin-like 109 592 IPR036852 GO:0004252|GO:0006508
Seca5g02084 737 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 109 IPR037045 -
Seca5g02084 737 FunFam Subtilisin-like protease SBT1.5 132 346 - -
Seca5g02084 737 CDD PA_subtilisin_like 336 460 - -
Seca5g02084 737 Pfam Subtilase family 131 581 IPR000209 GO:0006508|GO:0008236
Seca5g02084 737 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 35 733 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g02084 Seca-Chr5 59663228 59668649 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g02084 52 735 Subtilisin-like Serine Gene Family AT5G59190 49.568 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g02084 - - gmx:100795826 1159.82