Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g02003 ATGGATTTAAATAGTGATGATTCGGCTGTTAATCTGGAAGATGATAGAGACCTAAGTTATAGTGATTCTTCTAGCTCTAGCGATGATGAGAATCATAATGAAAATGATAGAGTAACAGATACTGAGGATGAAGTTAATGAAGAAGAGGTAGACACTGATGAGTTAAATGAATTTATGGATGCAGAAGTTGGAGGGGAGGTGTCAAGGAGGATAATTGATTTGACAAATGATGATATATGGGCATTGGAATTCTGTACTGAAAATGATGCGTTCAATTTTTACTTTTCTTATGCAAAATGTCATGGATTTGCTGTGAGGAGGGATGATGTAATTAAAGACAGAAAAGGTATGGTCATAATGCGACAGTTCTTATGTAGTAGGGCTGGTTTGAGGGACAAAAAGCATTTGATTAGATTAGATCGGAAAAAGGAACATAGACCTCTTACTCGAACAAATTGTCAAGCTAAGTTGAGGGTTCGCTTTGATTATAAGACTGGGAAATTTAAGGTTGTTTCCTTTTTAGACTCTCATAACCATGATTTGACCCCTGCTAAATTTGTTCCTTTAATGCCTGCATATCGTTGTTTGAGTGATGGCGACAAAGCCCAAGTTGATGCATTGCATTCTCATGGTGTTAGACCTTGTCAAATAATGGGTTTTCTTGTTGATAAAAAAGGAGGTTATAGAAACGTCGGTTTTTCAAAGAAAGATTTATACAACTACATAGATGAGGTTAGGAGGGGTAAGATAAAAGATGGGGATGCAGTGGCTGGGTTAAGTTATTTGCAAGGAAAGGCAGATAACAATCCAATGTTTTTTTCAAGATTTTTATGTTCTGAGGATGGGAAACTCAGTCATCTGTTTTGGTGTGATGAAATAAGTCGGGAAGACTATCAATTTTTTTGGTGA 909 0.3641 MDLNSDDSAVNLEDDRDLSYSDSSSSSDDENHNENDRVTDTEDEVNEEEVDTDELNEFMDAEVGGEVSRRIIDLTNDDIWALEFCTENDAFNFYFSYAKCHGFAVRRDDVIKDRKGMVIMRQFLCSRAGLRDKKHLIRLDRKKEHRPLTRTNCQAKLRVRFDYKTGKFKVVSFLDSHNHDLTPAKFVPLMPAYRCLSDGDKAQVDALHSHGVRPCQIMGFLVDKKGGYRNVGFSKKDLYNYIDEVRRGKIKDGDAVAGLSYLQGKADNNPMFFSRFLCSEDGKLSHLFWCDEISREDYQFFW. 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g02003 302 MobiDBLite consensus disorder prediction 9 39 - -
Seca5g02003 302 Pfam FAR1 DNA-binding domain 92 182 IPR004330 -
Seca5g02003 302 MobiDBLite consensus disorder prediction 1 54 - -
Seca5g02003 302 MobiDBLite consensus disorder prediction 40 54 - -
Seca5g02003 302 PANTHER OS01G0519700 PROTEIN 81 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g02003 Seca-Chr5 57809805 57810713 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca5g02003 FAR1 1.4e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g02003 - - ccaj:109794460 302.367