Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g01999 ATGCAGAAGCAATTTAGGCAGCCAGGTGTTAAGCAACCACCTGTGCAAAAAAAAGAAGATTCTTCTCAAGGGGTGCCCTTTTCATTTGTTGGCGAGCATCAGGGCAATGTCTCTGACAATCCTGTTGATGCATCGCCAATATACAACATCAACATGAGCCATCAGACCCCCATGGCTTACATGACAAGAGCCAAAACTCTACTAGGAGTAAAACCAGCTCCTGTAATAGCTTCATTCTCATCTAGGGGACCTAACTCAATCCAACCAATAATCCTCAAGCCTGATATCACTGCACCAGGTGTGGACATTCTTTTTGCATTCACAGAATCCATAAGTCCAACTGGTCTTCCATCAGATAATCGCCGGATTCCATATAATATTGGGTTAGGAACTTCTGCATCTTGCCCTCATGTTTCTGGAATTGTTGGCCTTCTCAAAACACTCTATCCCAATTGGAGTCCTGCAGCCTTGAGATCTGCTATCATGACTACTGGGTGTCTTTTGCTTATGGGTAAGGGGCAAGCACACAGGATACGCAAGGGTTGA 546 0.4487 MQKQFRQPGVKQPPVQKKEDSSQGVPFSFVGEHQGNVSDNPVDASPIYNINMSHQTPMAYMTRAKTLLGVKPAPVIASFSSRGPNSIQPIILKPDITAPGVDILFAFTESISPTGLPSDNRRIPYNIGLGTSASCPHVSGIVGLLKTLYPNWSPAALRSAIMTTGCLLLMGKGQAHRIRKG. 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g01999 181 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 25 164 IPR045051 -
Seca5g01999 181 SUPERFAMILY Subtilisin-like 72 166 IPR036852 GO:0004252|GO:0006508
Seca5g01999 181 Gene3D Peptidase S8/S53 domain 69 165 IPR036852 GO:0004252|GO:0006508
Seca5g01999 181 MobiDBLite consensus disorder prediction 16 41 - -
Seca5g01999 181 ProSitePatterns Serine proteases, subtilase family, serine active site. 130 140 IPR023828 -
Seca5g01999 181 ProSiteProfiles Serine proteases, subtilase domain profile. 1 181 - -
Seca5g01999 181 MobiDBLite consensus disorder prediction 1 41 - -
Seca5g01999 181 Gene3D - 41 68 - -
Seca5g01999 181 Pfam Subtilase family 72 164 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g01999 Seca-Chr5 57724184 57725593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g01999 43 164 Subtilisin-like Serine Gene Family AT5G59810 61.475 1.34e-44 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g01999 - - bhj:120090550 174.866