Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g01939 ATGTCCACAACAAGAATTCAAGTTTCGGCGTGCGCGCTGTCCGCCACCGTCAACAACCTTCGCCTCCGCCCTAACGCCGTCTTTTCAACTAACTCCGGTTTCAGTTTCAGACCCCTCAGGAAGCCTCTCAGGGTCTCAATGTCTTCCGTTCCTCCTTCCGAGCCCTTCGAAATCGCCGTTAAAGCTTCTATCACCACACCCAACAGACTCGGCGACTGCCCTTTTTGCCAAAGGGTATTGCTGACACTGGAGGAAAAACATCTACCTTATGACCCGAAATTTGTGGATTTGACCAACAAGCCTGAATGGTTCCTTACAATCAATCCTGAAGGTAGAGTTCCTGTGATAAAGTTTGATGAGAAGTGGGTTTCAGATTCAGATGTTATCACACAGACATTGGAAGAGAAGTATCCTAGTCCACCATTGGTGACCCCACCTGAAAAGGCTACAGTGCATTTTTTGTTTGTTTGTAGTGGGTCAAAGATCTTTTCTACATTTATTGGATTTCTCAAGAGCAAAGATCCCAATGATGGAACGGAGCAAGCATTACTAAATGAACTGAGCTCTTTCAATGATTACCTCAAGGAAAATGGTCCTTTTGTCAATGGGAGAGACATATCTGCAGCTGACCTGTCACTTGGACCAAAGCTATACCATTTGGAGATTGCTTTGGGGCATTATAAGAAATGGACAGTACCTGATTCACTTACCTACGTGAAGTCTTATATGGAGGCTGTTTTCTCGAGGGAATCATTCATCAAAACACGTGCACAACCACAGGATGTCATTGAAGGCTGGCGTCCTAAAGTGGAGGGCTAA 819 0.453 MSTTRIQVSACALSATVNNLRLRPNAVFSTNSGFSFRPLRKPLRVSMSSVPPSEPFEIAVKASITTPNRLGDCPFCQRVLLTLEEKHLPYDPKFVDLTNKPEWFLTINPEGRVPVIKFDEKWVSDSDVITQTLEEKYPSPPLVTPPEKATVHFLFVCSGSKIFSTFIGFLKSKDPNDGTEQALLNELSSFNDYLKENGPFVNGRDISAADLSLGPKLYHLEIALGHYKKWTVPDSLTYVKSYMEAVFSRESFIKTRAQPQDVIEGWRPKVEG. 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g01939 272 Pfam Glutathione S-transferase, N-terminal domain 72 141 IPR004045 -
Seca5g01939 272 SFLD Main (cytGST) 72 246 - -
Seca5g01939 272 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 144 272 IPR010987 -
Seca5g01939 272 Gene3D Glutaredoxin 55 142 - -
Seca5g01939 272 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 55 269 IPR044627 GO:0033355|GO:0045174|GO:0098869
Seca5g01939 272 Gene3D - 143 272 - -
Seca5g01939 272 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 63 141 IPR004045 -
Seca5g01939 272 FunFam Glutathione S-transferase DHAR3 chloroplastic 54 142 - -
Seca5g01939 272 CDD GST_C_DHAR 142 269 - -
Seca5g01939 272 FunFam Glutathione S-transferase DHAR3, chloroplastic 143 272 - -
Seca5g01939 272 SFLD Glutathione Transferase (cytosolic) 72 246 IPR040079 -
Seca5g01939 272 CDD GST_N_family 73 134 - -
Seca5g01939 272 SUPERFAMILY Thioredoxin-like 72 139 IPR036249 -
Seca5g01939 272 SUPERFAMILY GST C-terminal domain-like 136 269 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g01939 Seca-Chr5 55913307 55917469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g01939 1 272 Glutathione S-transferase Gene Family AT5G16710 66.423 6.79e-126 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g01939 K21888 - gmx:732557 453.751