Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g01924 ATGAAAATTGTGGAAGTAGGTGCAGTAATAGAACTCATTGAGCTTGCACTTGAGAAATTGGAAAAGAGTGTAACAAAGCTTATACTTATACTTTTGGCACATCTATGTTCTTGTGCTGATGGGAGAGAACGGTTTCTACAGCATGCAGGGGGTATAGCCCTGCTACCTGCAGTGAAGATGACAACCTCATCACCGCAGCCACAGCACTCGCTCGAAGCAAATGACGACCTTGAACTTCCGGCCATGATTGATGAACGACGAAGGAGAGGAGGAAGAAACGAAGACTTTACTTGTTGGATTGGGGCTTTTCAATTTCATAAGCTATGGTCAAAGTCAATCACAAATGTGGGGAGTAGAGGTGAATCTGCAATACTTTAG 378 0.4365 MKIVEVGAVIELIELALEKLEKSVTKLILILLAHLCSCADGRERFLQHAGGIALLPAVKMTTSSPQPQHSLEANDDLELPAMIDERRRRGGRNEDFTCWIGAFQFHKLWSKSITNVGSRGESAIL. 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g01924 125 PANTHER WDSAM1 PROTEIN 2 55 IPR045185 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g01924 Seca-Chr5 55514446 55514823 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g01924 3 55 U-box Gene Family AT3G11840 50.000 2.64e-09 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g01924 - - gmx:100778547 78.5666