Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g01904 ATGGGTGTCCAACGTGTTCTTTCAAAGTTTAGGAGAATGCCTGAATTGGAGCAGAGCAAGAAAATGGTGAACCAAGATAGTTTTCTGAGGCAGAGGATCCAGAAGGCCAAAGAACAGGTGAAGAAACAGAGGAAGGATAACAGGGAAAAGGAGATGACCCAACTCATGTTTCAGTGCCTAAGTGCAGGTAACATAATGCAAAATATAAGTATGGTTGATTTGAATGATTTGGCATGGTTGATTGACCAGAACTTGAAGGACATCAATAGAAGGATTGAAACATTGACTAAGAATGCTGCTCAAGCCCAAGCCCAAATGGCTGCACCACCACCAGTGTTGACTGATGTTAATGTAGTAGCCAAGATTGAAGAGAATGTACAAGGGAGTCATGGCCAAGGATTTGATATGAACATGGATGTCATGCAAAAGCAGCATTGGTTTATGAATTTGATGAATAGTGGTGGTGCGGATGAGACAATGCCTTTGGCAGATCTTAATCACCAAAATAGCTTTTGGCAAAACCCATTTTTCCATTGA 537 0.4134 MGVQRVLSKFRRMPELEQSKKMVNQDSFLRQRIQKAKEQVKKQRKDNREKEMTQLMFQCLSAGNIMQNISMVDLNDLAWLIDQNLKDINRRIETLTKNAAQAQAQMAAPPPVLTDVNVVAKIEENVQGSHGQGFDMNMDVMQKQHWFMNLMNSGGADETMPLADLNHQNSFWQNPFFH. 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g01904 178 Coils Coil 85 105 - -
Seca5g01904 178 Coils Coil 26 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g01904 Seca-Chr5 55048064 55048600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g01904 2 101 Type I MADS-box Gene Family AT5G48670 56.000 2.41e-35 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g01904 - - gmx:100816084 260.381