Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g01897 ATGGGTGTCCAACGTGTGCTTTCAAAGTTCAGGAGAATGCCTGAATTGGAGCAGAGCAAGAAGATGGTGAACCAAGAGAGTTTTCTGAGGCAGAGGATCCAAAAGGCCAAAGAACAGGTGAAGAAACAGAGGAAGGATAACAGGGAAAAGGAGATGACCCAACTCATGTTTCAGTGCCTAAGTGCAGGTAACATTATGCAAAATATAAGTATGGTTGATTTGAATGATTTGGCATGGTTGATTGACCAGAACTTGAAGGACATCAATAGAAGGATTGAAACATTGACTAAGAATGCTGCTCAAGCCCAAGCCCAAGCCCAAGCCCAAATGGCTGCACCACCACCAGTGTTGACTGATGTTAATGTAGTAGCCAAGATTGAAGAGAATGTACAAGGGAGTCATGGCCAAGGATTTGATATGAACATGGATGTCATGCAAAAGCAGCATTGGTTTATGAATTTGATGAATAGTGGTGATGCGGATGAGACAATGCCTTTGGGAGATCTTAATCACCAAAATAACTTTTGGCCAAACCCATTTTTCCATTGA 549 0.4226 MGVQRVLSKFRRMPELEQSKKMVNQESFLRQRIQKAKEQVKKQRKDNREKEMTQLMFQCLSAGNIMQNISMVDLNDLAWLIDQNLKDINRRIETLTKNAAQAQAQAQAQMAAPPPVLTDVNVVAKIEENVQGSHGQGFDMNMDVMQKQHWFMNLMNSGDADETMPLGDLNHQNNFWPNPFFH. 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g01897 182 Coils Coil 85 112 - -
Seca5g01897 182 Coils Coil 26 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g01897 Seca-Chr5 54988072 54988620 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g01897 2 124 Type I MADS-box Gene Family AT5G48670 50.407 1.04e-36 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g01897 - - gmx:100816084 265.388