Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g01872 ATGTTGATCTTGATCAAGGAGAGCAAAAGCAACCTGAGTTCCTTCTCAAACAGCCCTTTGGTCAAGTTCCGGTCGTGGAGGATGGTGATTTCAGGCTCTTTGGAATCCAGGGCTATTATAAGGTACTATGCAGCAAAGTATGCAGACCGTGGTCCTGACCTATTAGGTACAACCTTAGAGGAGAGAGCATTGGTTGACCAGTGGCTTGAAGTAGAAGGACACAATTTCAATGATTTAGGTTTCACTGTCATGTTTCAGCTTGTGATCCTACCAAGGATGGGTCAGCCTGGAGACTTGGCCTTGGCTCACAGCTGTGTGCAAAAGCTTGAGAAGGTCCTTGATGTCTATGAAAATAGGCTCTCCAAAAGTACATATCTTGCTGGTGATAACTTCACTTTGGCTGATCTCACCCACCTTCCAGGGATTGGACATCTCATTGAGGAAGCCAATTTGGGGCACTTAATTACTGAGAGGAAGAATGTGAGTGCTTGGTGGAACAACATTTCAAGTAGGCCAGCTTGGAAGAAGTTAAAGCAATTGGTTCAGTAA 549 0.4499 MLILIKESKSNLSSFSNSPLVKFRSWRMVISGSLESRAIIRYYAAKYADRGPDLLGTTLEERALVDQWLEVEGHNFNDLGFTVMFQLVILPRMGQPGDLALAHSCVQKLEKVLDVYENRLSKSTYLAGDNFTLADLTHLPGIGHLIEEANLGHLITERKNVSAWWNNISSRPAWKKLKQLVQ. 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g01872 182 Gene3D - 56 177 - -
Seca5g01872 182 SUPERFAMILY GST C-terminal domain-like 50 177 IPR036282 -
Seca5g01872 182 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 58 182 IPR010987 -
Seca5g01872 182 PANTHER GLUTATHIONE S-TRANSFERASE RHO 34 179 - -
Seca5g01872 182 SFLD Glutathione Transferase (cytosolic) 34 171 IPR040079 -
Seca5g01872 182 CDD GST_C_Phi 60 178 IPR034347 -
Seca5g01872 182 Pfam Glutathione S-transferase, C-terminal domain 96 172 IPR004046 -
Seca5g01872 182 FunFam Glutathione S-transferase F2 56 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g01872 Seca-Chr5 54172138 54175932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g01872 34 180 Glutathione S-transferase Gene Family AT3G03190 55.102 2.79e-57 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g01872 K00799 - gmx:100796010 253.062