Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g01836 ATGAGGGCTGTGGCTCTCTATAGGAGCACTGCTCTGTATGGTCCCACTAAACTTACTCATGCTAATTCTAGGAAGTATAATTTTCCATGGATACCCGAATTGTCCATTGAATCCTTACATCTAGATATCTTGAATTGGCATCCTATCTTGTACTATAAACGTGTATTTGGAGAGTTCTTCGTGGCAACTGATGTAAATGTTGAAAAGAACTCATCTGTTACTGTTCATGCATCCCAATACCATCGCTTTGGATGGCTACTTTTCTTGACACTTCGTGTACATGCTTTCAGTCGTTTCAAAGATTTGATGACTTTTCTTGACACTTCGTGTACATGCTTTCTAGGTTTTCAGTTTCATTGTGAGTAA 366 0.388 MRAVALYRSTALYGPTKLTHANSRKYNFPWIPELSIESLHLDILNWHPILYYKRVFGEFFVATDVNVEKNSSVTVHASQYHRFGWLLFLTLRVHAFSRFKDLMTFLDTSCTCFLGFQFHCE. 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g01836 121 Pfam Domain of unknown function (DUF3452) 50 108 IPR024599 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g01836 Seca-Chr5 53228888 53229840 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g01836 33 104 Core Cell Cycle Gene Families AT3G12280 52.632 5.34e-17 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g01836 K04681 - gmx:100779266 109.383