Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca5g01806 | ATGCTGCAACTTAAGCTTCTAGCCTTAACCCTGTTCATGTTGTGGTCATGTCACTGTGCACTAGGAGACCCTCAAATCCGTTTACTGAACAAGGGTTGCAGCCAATACAACGCAACTAACTTGAGAAGCTTCTACCAAAATCTAAACGCAACTTTGGCAGACTTGAAAGCACAAGTGAGCAACCAAAGCAAGCACTTTGCCACAGCACAACAAGCCAGGGGAGCAGACCCTGTTTATGCTATGTTTCAATGTAGGAATTACCTCTCCAACGCTGACTGTGCCGCCTGCTTCACTACCGCCGCTGCACAAATCCGCAACTGCTCCGCCGGAGCCAATGGTGCCCGTGTCATTTATGATGGTTGCTTACTTAGGTACGAGAGCAATGGCTTAATCTTCAACCAAACTACTCTGCCTGGAAATAGTATGATTTGTGGAAATGAAACTACAAAAGAAGCCACCGCTTTTGGTGCAAGTGCACAACAAGTGCTAATGGATCTACAAATAGCAACACCCAAAATTACTGGTTTCTTTGCAGCTACCAAGACACCAGTGGCTAATGGTTCAATCTATGCCATTGCACAATGTGCTGAAACTGTCTCAGAAAGTGGTTGTTTGGATTGTTTAACAGTTGGATACAACAACATAAAAAGTTGTTTTCCTAATACAGATGGTAGAGCATATGATGCTGGGTGTTTTATGAGATACTCAGACACATCATTCTTTGCTGACAACCAGACCATTGACATCACACCCTTATTAAAACAAGGTAGAATTAAGCATGCAGATGTAGGGGGTTCAAGCAAGAAGGGGGCCATTATTGGGGGTGTTGTTGGAGGTGTAGGTCTTGTTGTGATCCTTCTTGCATTATTTGTTTGGCTTAAGCAATACAAGAAACCAAAGAGAATTCCTAGAGGTGACATATTGGGAGCAACTGAGTTGAGAGGTCCAGTTATCTACAGCTATAAAGATTTAAAGTCTGCAACAAAAAATTTTAGTGATGAAAATAAACTAGGAGAAGGAGGATTTGGAGATGTATATAAGGGCACTCTGAAAAATGGTAAAATTGTGGCAGTCAAGAAATTAATTTTAGGCCAATCCAGTAAGATGGATGAACACTTTGAAAGTGAAGTCAAGCTCATAAGCAATGTTCATCATAGGAATCTAGTTCGACTTCTTGGATGTTGCAGTAAAGGCCAAGAGAGAATCCTTGTTTATGAATACATGGCAAACAGCAGCCTTGATAGATTCTTATTTGGTGAAAAGAAAGGTTCTCTCAATTGGAAATACCGATATGACATAATTTTAGGCACAGCAAGGGGTTTAGCCTATTTACATGAGGATTTCCATGTTTGCATCATACATAGAGATATAAAGACTGGCAATATCCTCTTGGATGATGATCTTCAGCCTAGAATTGCTGATTTTGGGTTGGCAAGACTTTTACCACAGGACCAATCTCATGTCAGCACAAAATTTGCAGGAACATTGGGATACACAGCACCTGAGTATGCAATCCATGGTCAGCTATCAGAGAAGGCTGATACCTACAGCTTTGGTGTTGTAGTCCTAGAAATTGTAAGTGGCCAAAAAAGCAGTGAAATGAGGGCTGATGCTGATGGGGAATTCCTCCTTCAAAGGGCATGGAAACTATATGAGGAAGATATGCACTTGGAGTTGGTTGACAAGACATTGAATGTTGAAGAATATGATGCAGAAGAAGTGAAGAAAATTATAGAAATTGCTTTATTGTGCACTCAAGCATCGGCTGCTGCAAGGCCAACAATGTCTGAAATAGTAGTACTACTCAAAAGCAAGAACCTATTGGAGCATATGAAGCCATCCATGCCTGTCTTTGTTGAATCTAATGTTAGGCCCCGGACAGACACCTCTACCTCAACTGCTTCATCTACATCTAATGCTACTGCTTCCACTTCTATATTATCGGCTCGATGA | 1953 | 0.4142 | MLQLKLLALTLFMLWSCHCALGDPQIRLLNKGCSQYNATNLRSFYQNLNATLADLKAQVSNQSKHFATAQQARGADPVYAMFQCRNYLSNADCAACFTTAAAQIRNCSAGANGARVIYDGCLLRYESNGLIFNQTTLPGNSMICGNETTKEATAFGASAQQVLMDLQIATPKITGFFAATKTPVANGSIYAIAQCAETVSESGCLDCLTVGYNNIKSCFPNTDGRAYDAGCFMRYSDTSFFADNQTIDITPLLKQGRIKHADVGGSSKKGAIIGGVVGGVGLVVILLALFVWLKQYKKPKRIPRGDILGATELRGPVIYSYKDLKSATKNFSDENKLGEGGFGDVYKGTLKNGKIVAVKKLILGQSSKMDEHFESEVKLISNVHHRNLVRLLGCCSKGQERILVYEYMANSSLDRFLFGEKKGSLNWKYRYDIILGTARGLAYLHEDFHVCIIHRDIKTGNILLDDDLQPRIADFGLARLLPQDQSHVSTKFAGTLGYTAPEYAIHGQLSEKADTYSFGVVVLEIVSGQKSSEMRADADGEFLLQRAWKLYEEDMHLELVDKTLNVEEYDAEEVKKIIEIALLCTQASAAARPTMSEIVVLLKSKNLLEHMKPSMPVFVESNVRPRTDTSTSTASSTSNATASTSILSAR. | 651 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca5g01806 | 650 | Gene3D | Phosphorylase Kinase; domain 1 | 308 | 407 | - | - | |
Seca5g01806 | 650 | Coils | Coil | 45 | 65 | - | - | |
Seca5g01806 | 650 | Gene3D | Transferase(Phosphotransferase) domain 1 | 408 | 615 | - | - | |
Seca5g01806 | 650 | PANTHER | CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 | 79 | 639 | - | - | |
Seca5g01806 | 650 | ProSiteProfiles | Gnk2-homologous domain profile. | 137 | 240 | IPR002902 | - | |
Seca5g01806 | 650 | FunFam | Cysteine-rich receptor-like protein kinase 2 | 408 | 610 | - | - | |
Seca5g01806 | 650 | ProSiteProfiles | Gnk2-homologous domain profile. | 26 | 130 | IPR002902 | - | |
Seca5g01806 | 650 | FunFam | Cysteine-rich receptor-like protein kinase 2 | 25 | 130 | - | - | |
Seca5g01806 | 650 | CDD | STKc_IRAK | 337 | 603 | - | - | |
Seca5g01806 | 650 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 452 | 464 | IPR008271 | GO:0004672|GO:0006468 | |
Seca5g01806 | 650 | FunFam | Cysteine-rich receptor-like protein kinase 2 | 139 | 240 | - | - | |
Seca5g01806 | 650 | Pfam | Protein kinase domain | 332 | 599 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca5g01806 | 650 | SUPERFAMILY | Protein kinase-like (PK-like) | 315 | 633 | IPR011009 | - | |
Seca5g01806 | 650 | Pfam | Salt stress response/antifungal | 33 | 127 | IPR002902 | - | |
Seca5g01806 | 650 | Pfam | Salt stress response/antifungal | 144 | 237 | IPR002902 | - | |
Seca5g01806 | 650 | MobiDBLite | consensus disorder prediction | 622 | 650 | - | - | |
Seca5g01806 | 650 | SMART | serkin_6 | 331 | 608 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca5g01806 | 650 | ProSiteProfiles | Protein kinase domain profile. | 331 | 618 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca5g01806 | 650 | MobiDBLite | consensus disorder prediction | 623 | 650 | - | - | |
Seca5g01806 | 650 | FunFam | Cysteine-rich receptor-like protein kinase 2 | 296 | 407 | - | - | |
Seca5g01806 | 650 | ProSitePatterns | Protein kinases ATP-binding region signature. | 337 | 360 | IPR017441 | GO:0005524 | |
Seca5g01806 | 650 | Gene3D | - | 25 | 129 | IPR038408 | - | |
Seca5g01806 | 650 | Gene3D | - | 140 | 240 | IPR038408 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca5g01806 | Seca-Chr5 | 52632732 | 52638817 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca5g01806 | 1 | 650 | Receptor kinase-like Gene Family | AT1G70520 | 37.216 | 6.17e-132 | 400 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Seca5g01806 | Pkinase | 6.1e-50 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca5g01806 | - | - | gmx:100813585 | 1013.45 |