Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g01762 ATGTTTTCTCTTGGAAACATACAAATATTGTCTGTGAGCCAACCTGACATAGTGAAAGATATCACCACATGCACCTCCTTGGACTTGGGGAAGCCTTCATATCAGCAAAGACAACTAGGGCCTTTGTTGGGTAGGGGCGTTTTGACTTCAAATGGGACTATATGGGCCCATCAAAGAAAGATCCTAGCTCCAGAACTATACATGGAGAAGGTTAAGGGAATGATGAAAATAGTTAGTGAGTCCTCTATATCACTACTAAACTTGTGGAGTAGTAGAATAGAGGCAGAAGGTGGAGTTGCAGATATAAAAATTGATGAGTACATGAGAACTTTCTCTGGGAATGTTATCTCAAGAGCATGTTTTGGAAGCAATTATTCCAAAGGGGAAGAAATTTTCTTGAAACTCAGAGCTCTCCAAGAGGTCATATGCTGGAAAAATATGTCCAAAGGGGTCCCTGGTATGAGATACCTTCCAACAAAGACAAATAGAAAAGCATGGGCATTAGAAAAGGAGGTGACAAGTTTGATACTCCAAGGGGTGAAGGAAAGAAAGGAAAGTAATTTTGAAAAGGACCTTTTGCAAATGGTTCTTGAGGGTGCTAAAAAAAGCAACCTCACTCAAGAAGCCACTGATTGTTTTATTGTTGATAACTGCAAGAACATATACTTGGCAGGTTATGAGACAACTGCAATTGCTGCTACATGGTGCCTTATGTTGTTAGCCTCAAATCAAAGTTGGCAAGATCGTGTTCGAGCTGAGGTACTAGAAATTTGCCAGGGAAGGATCCCAGATTATGATATGCTTTGTAAGATGAAGCAGCTAACAATGGTTATTCATGAGTCATTGCGCCTCTATCCTCCTGTAGCTGTGATGTCAAGACAAGCCTTCAAGGACATGAAATTTGGCAATATTGATGTTCCTAAGGGCCTTAGCCTTTGGATAATGGTAATAACTTTGCATACAGATCCAGATATATGGGGAGCTGATGCCTACAAATTCAACCCAGAAAGATTTGCCAATGGAACCATAGGTGCTTGTAAGCTGCCACATGTGTATATGCCCTTTGGTCTTGGTCCAAGAGTGTGTCTTGGACAGAACTTGGCTATGGTTGAACTTAAGATGATGATAGCTCTCATCTTGTCTAAATTCTCTTTCTCCCTTTCTCCTAGATACATCCATTCACCTGCTCTTAGGTTGCTTATGGAGCCTGCCCATGGAGTCCATCTCTTAGTAAGAAAACTATAA 1245 0.4096 MFSLGNIQILSVSQPDIVKDITTCTSLDLGKPSYQQRQLGPLLGRGVLTSNGTIWAHQRKILAPELYMEKVKGMMKIVSESSISLLNLWSSRIEAEGGVADIKIDEYMRTFSGNVISRACFGSNYSKGEEIFLKLRALQEVICWKNMSKGVPGMRYLPTKTNRKAWALEKEVTSLILQGVKERKESNFEKDLLQMVLEGAKKSNLTQEATDCFIVDNCKNIYLAGYETTAIAATWCLMLLASNQSWQDRVRAEVLEICQGRIPDYDMLCKMKQLTMVIHESLRLYPPVAVMSRQAFKDMKFGNIDVPKGLSLWIMVITLHTDPDIWGADAYKFNPERFANGTIGACKLPHVYMPFGLGPRVCLGQNLAMVELKMMIALILSKFSFSLSPRYIHSPALRLLMEPAHGVHLLVRKL. 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g01762 414 Gene3D Cytochrome P450 1 413 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01762 414 PRINTS P450 superfamily signature 276 287 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01762 414 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01762 414 PRINTS P450 superfamily signature 353 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01762 414 PRINTS P450 superfamily signature 224 241 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01762 414 PANTHER CYTOCHROME P450 FAMILY MEMBER 4 406 - -
Seca5g01762 414 SUPERFAMILY Cytochrome P450 2 412 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01762 414 PRINTS E-class P450 group I signature 352 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01762 414 PRINTS E-class P450 group I signature 213 230 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01762 414 PRINTS E-class P450 group I signature 233 259 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01762 414 PRINTS E-class P450 group I signature 362 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01762 414 PRINTS E-class P450 group I signature 111 129 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01762 414 Pfam Cytochrome P450 3 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01762 414 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 355 364 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g01762 Seca-Chr5 51972312 51975188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g01762 17 411 Cytochrome P450 AT5G24900 44.963 4.35e-129 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g01762 K24544 - gmx:100785420 736.487