Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g01723 ATGGAGCCTGCACTTGTCTCCCTATTCTCTCACCTCCTCTCAGTAGGGTTTTGTTGTCTCATACTCATTATGCTACTTGGCTTTATTATATATACATCCCTCATCAAATCCTTGAAACATCAACACAGCACCAAAAAACCTAAACTCCCTCCAGGTCCAAAACCATGGCCTATAGTTGGAAATCTTCCTGAATTAATGCTAGCAAACAAGCCAACATTCAGATGGATACAAAACCTTATGAATAATCTCAACACTGAAATAGCATGTATCCGCCTGGGAAATGTCCATTTTATCCCTGTGAGTAGCCCTGAAATAGCACGTGATATATTGATAAGAAAGGATGCTGTTTTTGCATCAAGACCCTTGAATTGGTCCAGTGAGTATGTCTCATGTGGATATCTCACCACAGCTCTTGTTCCCTTTGGTGAACAGTGGAAGAAAATGAAGAAACTCATAACCAATGACTTGTTGTCACCTTTGAGGCACCAATGGCTTCATGACAAAAGAGTGGAAGAAGCTAACAACCTTGTGCGTTACGTGTATAACAAATGTAAAAGTGGTGGTGGTCTTGTGAATGTGAAGATTGCTGCACAGCATTACTCAGGGAACGTTATTAGGAGGTTGGTTTTCAATACAAGGTACTTTGGAGAGGGGTGTGAAGATGGAGGACCTGGCTTTGAGGAAGTAGAGCATATGCAAGCACTTTTCAAGGTGTTGAAGTACCTCTTTGCTTTTTCTGTTTCGGATTACATGCCATGTTTGAGGGGATTTGACTTGGATGGTCATGAGAAACACATGAAGGAGGCTGCTGAGATTGTGAGGAAATATCATGATCCCATCATTGAGGATAGAATTGAGCAATGGAAGAATGGGAAAAGGATAAAGGAAGAAGATTTGCTTGATGTTCTCATCTCTCTCAAAGATGCGGACAACAATGCACTCTTGACGGCTGATGAAATTAAATCTCAAATTATGGAAATAATGTTGGCAACCGTGGATAATCCATCAAATGCAATTGAATGGGGACTTTCTGAAATGATAAATCAACCTGAGCTACTTCAAAAGGCCATTAAAGAATTGGACAATGTGGTTGGTAAAGAAAGACAAGTCCAAGAATCAGATTTTCCGAAGCTCAACTATGTGAAGGCTTGTGCAAGAGAAGCTTTTCGCCTTCATCCCATTGTGGATTTTATCATTCCACATGTCTCAGTAGCTGACACAGTTGTTGCCAATTACTTCATCCCAAAGGGTAGCCATGTGTTGCTAAGGAGACAAGGAGTTGGCCAAAACCCAAGGGTTTGGAAAGATCCCTTCAAGTTTAAACCTGAACGTCACCTTAAGAGTGATGGATCTAATTTGGTCTTAACAGAGCCAAGCTTGAAATTGATAACATTTAGCACTGGAAGACGTGGCTGTCCAGGGCTTATGCTTGGAACTGACATGACTGTTATGTTATTCGCTAGGTTGCTGCATGGCTTCACTTGGAGTGTTCCACCCAATCAATGTAGAATTGACCTCTCTGAATCAGAAGGAGATACCTCCAAAGCTAAACCACTTGTGGCATTTGCAAAGCCAAGGTTACCAACAGAGACTTATCGTATATAA 1605 0.4131 MEPALVSLFSHLLSVGFCCLILIMLLGFIIYTSLIKSLKHQHSTKKPKLPPGPKPWPIVGNLPELMLANKPTFRWIQNLMNNLNTEIACIRLGNVHFIPVSSPEIARDILIRKDAVFASRPLNWSSEYVSCGYLTTALVPFGEQWKKMKKLITNDLLSPLRHQWLHDKRVEEANNLVRYVYNKCKSGGGLVNVKIAAQHYSGNVIRRLVFNTRYFGEGCEDGGPGFEEVEHMQALFKVLKYLFAFSVSDYMPCLRGFDLDGHEKHMKEAAEIVRKYHDPIIEDRIEQWKNGKRIKEEDLLDVLISLKDADNNALLTADEIKSQIMEIMLATVDNPSNAIEWGLSEMINQPELLQKAIKELDNVVGKERQVQESDFPKLNYVKACAREAFRLHPIVDFIIPHVSVADTVVANYFIPKGSHVLLRRQGVGQNPRVWKDPFKFKPERHLKSDGSNLVLTEPSLKLITFSTGRRGCPGLMLGTDMTVMLFARLLHGFTWSVPPNQCRIDLSESEGDTSKAKPLVAFAKPRLPTETYRI. 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g01723 534 CDD CYP79 85 527 - -
Seca5g01723 534 SUPERFAMILY Cytochrome P450 50 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01723 534 Gene3D Cytochrome P450 34 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01723 534 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 465 474 IPR017972 GO:0005506|GO:0016705
Seca5g01723 534 FunFam Cytochrome P450 9 42 530 - -
Seca5g01723 534 PRINTS E-class P450 group I signature 105 126 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01723 534 PRINTS E-class P450 group I signature 462 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01723 534 PRINTS E-class P450 group I signature 472 495 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01723 534 PRINTS E-class P450 group I signature 382 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01723 534 PRINTS E-class P450 group I signature 319 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01723 534 PRINTS E-class P450 group I signature 339 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01723 534 PRINTS E-class P450 group I signature 200 218 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01723 534 PRINTS E-class P450 group I signature 423 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01723 534 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 20 533 - -
Seca5g01723 534 Pfam Cytochrome P450 50 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g01723 Seca-Chr5 51186404 51189328 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g01723 11 532 Cytochrome P450 AT4G39950 53.333 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g01723 - K13027 gmx:100809902 706.827