Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g01714 ATGGATTCTGTAATAACTAGCATGCTTCTCTTCCTATTGACATGCACTATCATCCATGTTCTTCATTCACTATATGCAAGAAACAGAAAACCAAACTACAAGCTTCCACCTGGACCTTCCCTTGTAACTATCATGGGAAACCTTCTTGAATTGTGCAAAAGGCCACATCAGACTCTGGCCAAGTTTTCTAATATCTATGGCCCAATAATGACTTTGAAGATAGGCCAAGCATCCACAACCACCATAATCATCTCATCAGTACATTTGGCCAAAGAGATTCTCCAAACCCATGATATATTATTCTCAGACAGAACAATTCCTGATATAACAACAGCTTACAATCACAATCACTTTAGCTTGGTCTTTCTCCCTGTTTCACCTCTGTGGCAAGACCTTAGGAAAATATGCCATAACCATTTATTTGCCTCCAAGACTCTTGATGCAAGTCAAGACCTTAGGCGCAAGAAACTGCAGGAACTCCTCAATGATATGCATCAAAGCAGCCTGACTGGTGAAACTGTTGATATTGGAAGAGCTGCTTTCAAGACTTGCATTAATTTCTTGTCTCACACATTTGTGTCTCAAGATTTTGTTCTGTCTTTGGATGATGAGTATAAGGATATAGTGGCGAGTCTCTTGAAAGCAACTGGAACACCAAACTTGGTGGATTTTTTCCCAGTGTTGAAGATGGTGGACCCACAAGGTGTTAGAAGGGACACAACTAATTACCTTACAAAGTTGTTTCATGTCTTGGACAGCTTGATTGATGAAAGGATGAGGCTAAGAGAAGGGAAGCATTATGTCACAAATAATGACATGTTAGACACCCTGCTTGACATTTCTCAAGAGAATATCCACAAGATGGATAAGAAAAAGATCAGGCATTTATTGCTTGATCTACTTGTGGCGGGAACAGATACAACAGCATATGCATTAGAAAGGTCAATGACTGAACTACTTCACAACCCAGAGACCATGTCAAAAGCCAAAAAGGAGCTTGAGCAAACCATTGGAATAGGAAATCCAATTGAGGAATCAGACATTACAAGACTTCCATACTTACAAGCAGTGATAAAAGAGAGTTTACGTTTATACCCTCCAGCTCCACTCTTACTCCCTCGGAAAGCTAAGGTAGATGTGGAAATATCTGGCTACACAATTCCAAAGGGTGCACAAGTCCTAATCAATGAGTGGGCTATTGGTAGAAACCCAAGCATATGGGACAATGCTGATTCATTTTCACCTGAAAGGTTTATGGGATCTGAACTTGATGTCAAAGGTCGACACTTTCAGCTTACACCATTTGGAAGTGGACGACGTATATGTCCTGGCTCACCACTTGCTATTAGGATGTTGCATTTGATGTTGGGATCGTTGGTCAACTCTTTTGACTGGAAACTTGAAGATAATATGGAACCAAAGGATAAACCCTTGAGAGCAATTCCAGTTGTAATAAACAACTAA 1464 0.403 MDSVITSMLLFLLTCTIIHVLHSLYARNRKPNYKLPPGPSLVTIMGNLLELCKRPHQTLAKFSNIYGPIMTLKIGQASTTTIIISSVHLAKEILQTHDILFSDRTIPDITTAYNHNHFSLVFLPVSPLWQDLRKICHNHLFASKTLDASQDLRRKKLQELLNDMHQSSLTGETVDIGRAAFKTCINFLSHTFVSQDFVLSLDDEYKDIVASLLKATGTPNLVDFFPVLKMVDPQGVRRDTTNYLTKLFHVLDSLIDERMRLREGKHYVTNNDMLDTLLDISQENIHKMDKKKIRHLLLDLLVAGTDTTAYALERSMTELLHNPETMSKAKKELEQTIGIGNPIEESDITRLPYLQAVIKESLRLYPPAPLLLPRKAKVDVEISGYTIPKGAQVLINEWAIGRNPSIWDNADSFSPERFMGSELDVKGRHFQLTPFGSGRRICPGSPLAIRMLHLMLGSLVNSFDWKLEDNMEPKDKPLRAIPVVINN. 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g01714 487 Gene3D Cytochrome P450 21 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01714 487 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Seca5g01714 487 FunFam Cytochrome P450 76C4 27 480 - -
Seca5g01714 487 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 10 475 - -
Seca5g01714 487 CDD CYP76-like 63 482 - -
Seca5g01714 487 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01714 487 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01714 487 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01714 487 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01714 487 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01714 487 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01714 487 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01714 487 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01714 487 PRINTS P450 superfamily signature 442 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01714 487 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01714 487 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01714 487 Pfam Cytochrome P450 36 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01714 487 SUPERFAMILY Cytochrome P450 31 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g01714 Seca-Chr5 51081128 51084129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g01714 4 475 Cytochrome P450 AT2G45550 43.064 1.48e-142 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g01714 - - gmx:100800810 687.952