Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g01710 ATGGGTTACATCCCTAGTTTTTTCCAGTCACACCTTCACTTCTTCTGGACTTCTTTACTCGTTATGATTTCTGGCTTTACAATTATCAAAGCCCTAAGATTTCACTTAATTGAGAAGTCCAAGAAACCCAACCTTCCCCCAGGTCCAAAACCATGGCCTATAGTTGGCAATCTTCCTGAAATGCTTGCAAACAAGCCTGCATTTCGGTGGATACTCAAGCTCATGAATGATCTCAACACCGAAATTGCATGCATCCGTTTAGGAAATGTCCATGTTATCCCTGTGATATGTCCCACAATTGCTCGTGAATTCTTGAGAAAACAAGACGCTATTTTTGCGTCAAGACCCATAAGCATGTCCACTAATGCTATTACTAGTGGTTATTTGACGACAGCCCTTGTGCCTTTTGGGGAACAATGGAAGAAAATGAAGAAAATTTTAGTCAATGATTTGTTCTCCCCTCCAAGGCATCAATGGCTTCAACATAAAAGGAATGAAGAAGCTGAGAACCTTGTGTTTTATGTCTACAACAAATGCAAAAATGTGAATAACAATAATAATAATATTCATGGCCTTGTGAATGTGAGGCTTGCTGCGAAGCATTATTGTGGTAATGTGTTCAGGAAGCTTGTTTTTAATACAAGGTATTTTGGAAAGGGTACGTTGGATGGAGGGCCTGGTGTTGAGGAAGTGGAACATGTGGATGCTGCTTTTACGTTGCTTATGTACATTTATGCATTTTGTGTTTCTGACTATATTTCATGTTTGAGAGGACTTGACTTGGATGGCCATAAGAGTAAGGTGAATGATGCTTTGAGGGTCATGAAGAAGTATCATGATTCCATCATTGAAGAGAGGATTCAACAATGGAATGATGGATTGAAGACCGTTGAAGAGGACTTGCTCGATGTTCTCATCTCACTGAAAGGTGTCAATAATAAACCATTATTGACATTGAAGGAAATCAAGGCGCAAATTATAGAATTGATGATTGAACTGGTGGACAATCCATCAAATGCTGTTGAATGGGCACTAGCAGAAATGATAAATAAGCCTGAGTTGCTTCAACGAGCTACTGAAGAATTGGACAACGTGGTTGGGAAAGAGAGGTTAGTCCAAGAATCAGATATTCCAAAGCTCAACTTTGTGAAGGCATGTGTAAGAGAAGCTTTTCGCCTTCATCCCATTGTGGCTTTTAATGTTCCCCATGTCTCCATGACTGATACAATGGTTTGCAATTACTTGATTCCAAAAGGTAGTCATGTGCTACTAAGCAGAAGTGGGCTTGGGAGAAACCCAAAAGATTGGACTGAGCCCCACAAATTCAAACCAGAACGCCATCTCAAGAGTGATGGGTCTGATGTAGTTTTGACAGAGCCAGATTTGAGGTTCATATCCTTTAGCACAGGAAGACGTAGTTGTCCAGGTGTAATGCTTGGCACCACAATGACAGTGATGTTACTTGCTAGGTTGCTCCAAGGCTTTCATTGGAGTGCACCTCCCAACATATCAAACATCAATCTTGCTGAGTCCAAAAGTGATATGTTCCTTGCCGAGCCACTTGTGGGAGTAGCAAAGCCAAGACTAGCAGCAGAACTATATATACCACATATGAATTAA 1620 0.408 MGYIPSFFQSHLHFFWTSLLVMISGFTIIKALRFHLIEKSKKPNLPPGPKPWPIVGNLPEMLANKPAFRWILKLMNDLNTEIACIRLGNVHVIPVICPTIAREFLRKQDAIFASRPISMSTNAITSGYLTTALVPFGEQWKKMKKILVNDLFSPPRHQWLQHKRNEEAENLVFYVYNKCKNVNNNNNNIHGLVNVRLAAKHYCGNVFRKLVFNTRYFGKGTLDGGPGVEEVEHVDAAFTLLMYIYAFCVSDYISCLRGLDLDGHKSKVNDALRVMKKYHDSIIEERIQQWNDGLKTVEEDLLDVLISLKGVNNKPLLTLKEIKAQIIELMIELVDNPSNAVEWALAEMINKPELLQRATEELDNVVGKERLVQESDIPKLNFVKACVREAFRLHPIVAFNVPHVSMTDTMVCNYLIPKGSHVLLSRSGLGRNPKDWTEPHKFKPERHLKSDGSDVVLTEPDLRFISFSTGRRSCPGVMLGTTMTVMLLARLLQGFHWSAPPNISNINLAESKSDMFLAEPLVGVAKPRLAAELYIPHMN. 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g01710 539 PANTHER CYTOCHROME P450 98A9 21 534 - -
Seca5g01710 539 Pfam Cytochrome P450 46 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01710 539 CDD CYP79 80 529 - -
Seca5g01710 539 PRINTS E-class P450 group I signature 341 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01710 539 PRINTS E-class P450 group I signature 425 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01710 539 PRINTS E-class P450 group I signature 474 497 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01710 539 PRINTS E-class P450 group I signature 202 220 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01710 539 PRINTS E-class P450 group I signature 464 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01710 539 PRINTS E-class P450 group I signature 384 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01710 539 PRINTS E-class P450 group I signature 100 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01710 539 FunFam Cytochrome P450 9 38 532 - -
Seca5g01710 539 Gene3D Cytochrome P450 38 531 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01710 539 SUPERFAMILY Cytochrome P450 46 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01710 539 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 467 476 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g01710 Seca-Chr5 51034254 51037933 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g01710 41 534 Cytochrome P450 AT4G39950 56.970 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g01710 - K12153 gmx:100809902 755.362