Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g01706 ATGTCTCTTTTTGCTCGAAGTGTTCCCCTGCTTTGGTTGCTTATAACATTCCTTTCAACCAGCGATATTGCTCTTGGAAAGACACATGTCAAGGTCGTAAATCATTTGACGGGCAATTTGGACTTAACCTTTCACTGCAAATCTAAGGATGACGATCTTGGAGTTCAACTTCTCCATCCTAGTGAGTCTTGGGAATTTAGTTTTATCCCTTCCGATTTCATTCGGATCACACAATTCTATTGTCTCTTTCAATGGCAAGATAATGTTGGAGTCCAAAAGAAATGGTTTGATATATACATAGCAACAAGGGATACAGATTGCGTAATTTGTACTTGGTTAATAAGCCAAGATAGACCTTGTAGGTACCTTTCTGAAAAGGTGTCTAGATGCATTGAATGGAATGATTAA 408 0.3824 MSLFARSVPLLWLLITFLSTSDIALGKTHVKVVNHLTGNLDLTFHCKSKDDDLGVQLLHPSESWEFSFIPSDFIRITQFYCLFQWQDNVGVQKKWFDIYIATRDTDCVICTWLISQDRPCRYLSEKVSRCIEWND. 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g01706 135 Pfam Plant self-incompatibility protein S1 29 133 IPR010264 -
Seca5g01706 135 PANTHER - 26 122 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g01706 Seca-Chr5 50961575 50961982 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g01706 15 134 Carbohydrate Esterase AT3G16970 37.795 4.20e-19 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g01706 - - cam:101513244 107.842