Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g01686 ATGGGTAACAACAGGTTTAAATTATCAGATATGATACCAAATGCATGGTTTTACAAACTCAAACTTATGAGCAGATCAAAGAAGCAAAATGGTTCTCATGTTATGAAGAACAAAGTAACCTCACCAACAACATCTCAAAGGTCTCAGGCAAGATACTCTCATTATATGTCCATTGAACCAAACAGAGCTGGTAAGTTATACAACTCTCCTATTTACACCAAAAACACCCTATTCACTGATTCACCAAGAATGTCATCCAAGAGAAGAACCAGGAGAAAGACCATTTATAAGCCTTCTCCCACAAATGTCTCATCCCCAGTCATAGATAGTTGTAGCTGTCATTCAACAAATAATTGGAGTAGGCCTAATCAAACTCAGCCTCAGAAGAACTATTATGTCTCCTCCATAGAGAGTTCTTCTGAATCAAATCTCAATGAATATGTTTCATCTGATTCTGAGTATGATAAGTTTACTGTTCCTGACTTGCATAATGGACTAGCTTCTGAATGCAGTTGTAGAATCAGCTCTTCCACAAATGACATCATCATTGACATGAAAAATGAATCCTTCACTAGAAATTCTGAAAATCTTGATGGGTTTGATACAATTTCACAGTTAGGTCTTGCTCCAATATTAACCAAGCCAGTGAAGTTTGATGATAAGGTCATTGAAGCCACTGAGTTGAGAAGATCAACTAAATTGTGTGAGCTAAAGGATCATCAGTCTCTATCTGTCAAAATTAGCAAAGAGGAAAGAAGTAGAACAAAGAAAGATAGAAAAACCAGTCCAATAGCTAGAATATCCTCTGCTAATTCTACAGGCATAAGGCTTAGAGTTAATTCTCCAAAACTTGCAAGCAGGAAAGTTCAAGCCTATGCAAGAAGGAGTGTGTCATCTAGTGCATGCAAAGCCTCAACAATTAAAGGTTTTCCAGAGGGCTTTGCAGTTGTTAAGTCCTCACTTGATCCACAAAGAGACTTCAGGGATTCAATGGTAGAGATGATTATGGAGAACAATATCCGAGCATCAAAAGATTTGGAGAACCTACTGGCCTGCTATCTTTCACTGAATTCAAGTGAATACCATGATCTCATTGTCAAAGCATTTGAGCAAATTTGGTATGACATGGCTCATCTCAAAATATAA 1146 0.3735 MGNNRFKLSDMIPNAWFYKLKLMSRSKKQNGSHVMKNKVTSPTTSQRSQARYSHYMSIEPNRAGKLYNSPIYTKNTLFTDSPRMSSKRRTRRKTIYKPSPTNVSSPVIDSCSCHSTNNWSRPNQTQPQKNYYVSSIESSSESNLNEYVSSDSEYDKFTVPDLHNGLASECSCRISSSTNDIIIDMKNESFTRNSENLDGFDTISQLGLAPILTKPVKFDDKVIEATELRRSTKLCELKDHQSLSVKISKEERSRTKKDRKTSPIARISSANSTGIRLRVNSPKLASRKVQAYARRSVSSSACKASTIKGFPEGFAVVKSSLDPQRDFRDSMVEMIMENNIRASKDLENLLACYLSLNSSEYHDLIVKAFEQIWYDMAHLKI. 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g01686 381 MobiDBLite consensus disorder prediction 78 102 - -
Seca5g01686 381 NCBIfam uncharacterized plant-specific domain TIGR01568 314 376 IPR006458 -
Seca5g01686 381 ProSiteProfiles OVATE domain profile. 316 375 IPR006458 -
Seca5g01686 381 Pfam Transcriptional repressor, ovate 320 376 IPR006458 -
Seca5g01686 381 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 136 376 IPR038933 GO:0045892
Seca5g01686 381 Pfam DNA-binding domain 1 47 IPR025830 GO:0003677
Seca5g01686 381 MobiDBLite consensus disorder prediction 27 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g01686 Seca-Chr5 50563067 50564212 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Seca5g01686 Ovate 1.2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g01686 - - gmx:100798120 592.038